RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PNOCQ13519 176 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 AGXT2Q9BYV1 514 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
SMPD4-201ENST00000351288 TSPY3P0CV98 308 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 TSPY8P0CW00 308 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 SKILP12757 684 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 SCNN1DP51172 638 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 GTF2IP78347 998 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
SMPD4-201ENST00000351288 DIS3L2Q8IYB7 885 aaKnown RBP11.96□□□□□ -0.49
SMPD4-201ENST00000351288 FMR1NBQ8N0W7 255 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-201ENST00000351288 EPB41L4AQ9HCS5 686 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-201ENST00000351288 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 PFKFB1P16118 471 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 SYKP43405 635 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 KIF23Q02241 960 aaPredicted RBP11.96□□□□□ -0.5
SMPD4-201ENST00000351288 GRIN1Q05586 938 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 ZNF827Q17R98 1081 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 OLFM4Q6UX06 510 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 TRMT1LQ7Z2T5 733 aaKnown RBP11.96□□□□□ -0.5
SMPD4-201ENST00000351288 TMC6Q7Z403 805 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 ZC3H12CQ9C0D7 883 aaKnown RBP11.96□□□□□ -0.5
SMPD4-201ENST00000351288 KAT14Q9H8E8 782 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 KIF1AQ12756 1690 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 PDE4BQ07343 736 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 UBE3CQ15386 1083 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 ANO1Q5XXA6 986 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 DYNLL2Q96FJ2 89 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 SPTLC3Q9NUV7 552 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 TNKSO95271 1327 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.5
SMPD4-201ENST00000351288 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 USP17L8P0C7I0 530 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 TCP10Q12799 353 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 RBM43Q6ZSC3 357 aaKnown RBP11.95□□□□□ -0.5
SMPD4-201ENST00000351288 NAT10Q9H0A0 1025 aaKnown RBP11.95□□□□□ -0.5
SMPD4-201ENST00000351288 CPVLQ9H3G5 476 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 COBLO75128 1261 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 NR5A1Q13285 461 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 NFIXQ14938 502 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 ZNF174Q15697 407 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 HEATR3Q7Z4Q2 680 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 XPO4Q9C0E2 1151 aaKnown RBP11.95□□□□□ -0.5
SMPD4-201ENST00000351288 ANO10Q9NW15 660 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMPD4-201ENST00000351288 ADALQ6DHV7 355 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
SMPD4-201ENST00000351288 BAG3O95817 575 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 ZNF654Q8IZM8 581 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 CRACR2BQ8N4Y2 399 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-201ENST00000351288 SLC44A5Q8NCS7 719 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 CCDC34Q96HJ3 373 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 GLI3P10071 1580 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 NTSR2O95665 410 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 TFAP4Q01664 338 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 MFSD14BQ5SR56 506 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 CCAR2Q8N163 923 aaKnown RBP11.94□□□□□ -0.5
SMPD4-201ENST00000351288 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
SMPD4-201ENST00000351288 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 SERPINB2P05120 415 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMPD4-201ENST00000351288 CASP1P29466 404 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 TEX11Q8IYF3 940 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 STX17P56962 302 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 MECOMQ03112 1051 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 VGLL2Q8N8G2 317 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 WASF1Q92558 559 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 DHX58Q96C10 678 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
SMPD4-201ENST00000351288 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-201ENST00000351288 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 MCM7P33993 719 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 CPLX3Q8WVH0 158 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 FAM84BQ96KN1 310 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-201ENST00000351288 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-201ENST00000351288 BCL9O00512 1426 aa11.93□□□□□ -0.5
SMPD4-201ENST00000351288 GSG1L2A8MUP6 293 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 GNAT2P19087 354 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 TJP1Q07157 1748 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 USP49Q70CQ1 688 aa11.92□□□□□ -0.5
SMPD4-201ENST00000351288 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms