RNA–Protein interactions for RNA: ENST00000350887.5

SNRNP35-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRNP35, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-201ENST00000350887 PICALMQ13492 652 aa13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 CDC42EP5Q6NZY7 148 aa13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 SYNE3Q6ZMZ3 975 aa13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 LLPHQ9BRT6 129 aaKnown RBP13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 SBF1O95248 1867 aa13.63□□□□□ -0.23
SNRNP35-201ENST00000350887 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 TSPY2A6NKD2 308 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 PDCP20941 246 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 HMGN5P82970 282 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 SCRN1Q12765 414 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 TNIP1Q15025 636 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 APOBEC3HQ6NTF7 200 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 TMTC2Q8N394 836 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 IGDCC4Q8TDY8 1250 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 LY9Q9HBG7 655 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 TNKSO95271 1327 aa13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-201ENST00000350887 ZBTB43O43298 467 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 PRDM1O75626 825 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 RASSF7Q02833 373 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 OGFOD1Q8N543 542 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 OSBPL5Q9H0X9 879 aaPredicted RBP13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 SLC12A7Q9Y666 1083 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 SIPA1L1O43166 1804 aa13.61□□□□□ -0.23
SNRNP35-201ENST00000350887 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 SMIM22K7EJ46 135 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 CPLX1O14810 134 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 WDHD1O75717 1129 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 NBR1Q14596 966 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 APOA5Q6Q788 366 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 C16orf86Q6ZW13 317 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 ZNF444Q8N0Y2 327 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 NKX2-3Q8TAU0 364 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 DYNLL2Q96FJ2 89 aa13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 ZSCAN10Q96SZ4 725 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 FHDC1Q9C0D6 1143 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-201ENST00000350887 TCHHQ07283 1943 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 PTPDC1A2A3K4 754 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 STX6O43752 255 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 CDKL5O76039 1030 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 BRD1O95696 1058 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 PLCD1P51178 756 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 EIF6P56537 245 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 EVX2Q03828 476 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 CXCL9Q07325 125 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 DLGAP5Q15398 846 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 GMLQ99445 158 aa13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 DDX4Q9NQI0 724 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-201ENST00000350887 NID2Q14112 1375 aa13.58□□□□□ -0.23
SNRNP35-201ENST00000350887 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 SOCS7O14512 581 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 JAK2O60674 1132 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 TSPY3P0CV98 308 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 TSPY8P0CW00 308 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 SYT1P21579 422 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 RPS12P25398 132 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 CDK8P49336 464 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 MMP14P50281 582 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 RCAN1P53805 252 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 TFAP4Q01664 338 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 PKP1Q13835 747 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 SEC23AQ15436 765 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 LARP1BQ659C4 914 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 IDI2Q9BXS1 227 aa13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-201ENST00000350887 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms