RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SAP30BPQ9UHR5 308 aaKnown RBP13.83□□□□□ -0.19
SMAD9-201ENST00000350148 ALX1Q15699 326 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 CCDC150Q8NCX0 1101 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 CLIP2Q9UDT6 1046 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 SPDYE3A6NKU9 549 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 CYP21A2P08686 494 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 CCDC17Q96LX7 622 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 TTF2Q9UNY4 1162 aaKnown RBP13.83□□□□□ -0.2
SMAD9-201ENST00000350148 M0R2C6 588 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 ZNF445P59923 1031 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 ACBD3Q9H3P7 528 aa13.83□□□□□ -0.2
SMAD9-201ENST00000350148 PLCD1P51178 756 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 NAP1L1P55209 391 aaKnown RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 TFAP4Q01664 338 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 KRT40Q6A162 431 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 MASTLQ96GX5 879 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 NWD1Q149M9 1564 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 EXOC1Q9NV70 894 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 CAMTA2O94983 1202 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 LMOD1P29536 600 aaPredicted RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 JAG2Q9Y219 1238 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 RCAN1P53805 252 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
SMAD9-201ENST00000350148 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 DIS3L2Q8IYB7 885 aaKnown RBP13.82□□□□□ -0.2
SMAD9-201ENST00000350148 TNNT1P13805 278 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 TYRO3Q06418 890 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 DLGAP5Q15398 846 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 KRT79Q5XKE5 535 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 CCDC24Q8N4L8 307 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 LEO1Q8WVC0 666 aaPredicted RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 PXDNQ92626 1479 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 BTDP43251 543 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 MAPKAPK5Q8IW41 473 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 CLSTN2Q9H4D0 955 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 RIPOR2Q9Y4F9 1068 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 OSBP2Q969R2 916 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 V9GY48 417 aaPredicted RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 ADCY5O95622 1261 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 LIFRP42702 1097 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 RASGRF1Q13972 1273 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 FANCBQ8NB91 859 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 NCOA5Q9HCD5 579 aaKnown RBP13.81□□□□□ -0.2
SMAD9-201ENST00000350148 CALCOCO1Q9P1Z2 691 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 MTMR6Q9Y217 621 aa13.81□□□□□ -0.2
SMAD9-201ENST00000350148 RRAGBQ5VZM2 374 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 DYDC1Q8WWB3 177 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 MINPP1Q9UNW1 487 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
SMAD9-201ENST00000350148 NFAT5O94916 1531 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
SMAD9-201ENST00000350148 ANO6Q4KMQ2 910 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 ANTXR1Q9H6X2 564 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 WWC3Q9ULE0 1092 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 TNKSO95271 1327 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 RXRAP19793 462 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 MCAMP43121 646 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 SSR1P43307 286 aaKnown RBP13.8□□□□□ -0.2
SMAD9-201ENST00000350148 TBC1D9BQ66K14 1250 aa13.8□□□□□ -0.2
SMAD9-201ENST00000350148 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
SMAD9-201ENST00000350148 PIH1D3Q9NQM4 214 aaKnown RBP13.79□□□□□ -0.2
SMAD9-201ENST00000350148 PIK3C2AO00443 1686 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 PSMA7O14818 248 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
SMAD9-201ENST00000350148 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 ERCC4Q92889 916 aaPredicted RBP13.79□□□□□ -0.2
SMAD9-201ENST00000350148 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 TUBB4AP04350 444 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 RTKN2Q8IZC4 609 aa13.79□□□□□ -0.2
SMAD9-201ENST00000350148 STRBPQ96SI9 672 aaKnown RBP13.79□□□□□ -0.2
SMAD9-201ENST00000350148 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms