RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PDE6BP35913 854 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 RRP12Q5JTH9 1297 aaKnown RBP8.07□□□□□ -1.12
TRIM55-203ENST00000350034 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 NBPF11Q86T75 865 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 MICU3Q86XE3 530 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 TBC1D22AQ8WUA7 517 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 MASTLQ96GX5 879 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 ZNF396Q96N95 335 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-203ENST00000350034 USP28Q96RU2 1077 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-203ENST00000350034 FUCA2Q9BTY2 467 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 COA1Q9GZY4 146 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 RNF216Q9NWF9 866 aaPredicted RBP8.07□□□□□ -1.12
TRIM55-203ENST00000350034 RTEL1Q9NZ71 1219 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 JAG2Q9Y219 1238 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 PARP3Q9Y6F1 533 aa8.07□□□□□ -1.12
TRIM55-203ENST00000350034 TNKSO95271 1327 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ERICH2A1L162 156 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 BAG3O95817 575 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 CYP2D6P10635 497 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 LIG1P18858 919 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 RXRAP19793 462 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 IARSP41252 1262 aaKnown RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 KIF23Q02241 960 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 EVX2Q03828 476 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 FUT2Q10981 343 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 RTN1Q16799 776 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 C12orf60Q5U649 245 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 OTUD7BQ6GQQ9 843 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 STYK1Q6J9G0 422 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 SYNE3Q6ZMZ3 975 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 RBM43Q6ZSC3 357 aaKnown RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 BRAPQ7Z569 592 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ZNF654Q8IZM8 581 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ENAHQ8N8S7 591 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 JMYQ8N9B5 988 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 FANCBQ8NB91 859 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 SH3RF3Q8TEJ3 882 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ZKSCAN3Q9BRR0 538 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 UBAC1Q9BSL1 405 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ALG1Q9BT22 464 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 MYL10Q9BUA6 226 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 TSPY26PQ9H489 355 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-203ENST00000350034 PCNTO95613 3336 aa8.06□□□□□ -1.12
TRIM55-203ENST00000350034 KIF28PB7ZC32 967 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 PPFIA3O75145 1194 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 DDAH1O94760 285 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 YEATS4O95619 227 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 SLC3A2P08195 630 aaKnown RBP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 PLCG2P16885 1265 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 FOSBP53539 338 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 RHBDL3P58872 404 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 EN1Q05925 392 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 SSRP1Q08945 709 aaKnown RBP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 TROAPQ12815 778 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 SLC15A2Q16348 729 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 KRT40Q6A162 431 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 CRACR2BQ8N4Y2 399 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 MPNDQ8N594 471 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 LINC00301Q8NCQ3 95 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 WASF1Q92558 559 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 AIFM3Q96NN9 605 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 PPP1R9BQ96SB3 815 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 TOMM22Q9NS69 142 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 GJB4Q9NTQ9 266 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
TRIM55-203ENST00000350034 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 TCHHQ07283 1943 aa8.05□□□□□ -1.12
TRIM55-203ENST00000350034 A0A1W2PQ27 194 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 A0A1W2PQ64 194 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 A0A1W2PQD8 194 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 PRDM1O75626 825 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 CALM1P0DP23 149 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 CALM2P0DP24 149 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 CALM3P0DP25 149 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 BTDP43251 543 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 PDE4BQ07343 736 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 EZH2Q15910 746 aaKnown RBP8.04□□□□□ -1.12
TRIM55-203ENST00000350034 MFSD14BQ5SR56 506 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 IQCA1Q86XH1 822 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 SLF2Q8IX21 1173 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 PHKBQ93100 1093 aa8.04□□□□□ -1.12
TRIM55-203ENST00000350034 RNF26Q9BY78 433 aaPredicted RBP8.04□□□□□ -1.12
TRIM55-203ENST00000350034 FTOQ9C0B1 505 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRIM55-203ENST00000350034 CLSTN2Q9H4D0 955 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms