RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 CNPY4Q8N129 248 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 COG1Q8WTW3 980 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 SLIT1O75093 1534 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 KLF18A0A0U1RQI7 1052 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 MYO1FO00160 1098 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 MFAP3LO75121 409 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 MAST3O60307 1309 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 FNTAP49354 379 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 HAND2P61296 217 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 MORC3Q14149 939 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
RLIM-202ENST00000349225 MMS19Q96T76 1030 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
RLIM-202ENST00000349225 CCDC189A1A4V9 331 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 GOLIM4O00461 696 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
RLIM-202ENST00000349225 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 SAMM50Q9Y512 469 aa16.2■□□□□ 0.18
RLIM-202ENST00000349225 M0R2C6 588 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 ENC1O14682 589 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 CDC25AP30304 524 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 NT5DC1Q5TFE4 455 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 HINFPQ9BQA5 517 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 TFR2Q9UP52 801 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 PIP4K2BP78356 416 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
RLIM-202ENST00000349225 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 STIM1Q13586 685 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 TUBB2AQ13885 445 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 PDIA6Q15084 440 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 MPRIPQ6WCQ1 1025 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 CTCFLQ8NI51 663 aaPredicted RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 TUBB2BQ9BVA1 445 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 FECHP22830 423 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 POSTNQ15063 836 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 STK11IPQ8N1F8 1099 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 BCAS4Q8TDM0 211 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 COPRSQ9NQ92 184 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 TRAPPC11Q7Z392 1133 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 ACBD3Q9H3P7 528 aa16.18■□□□□ 0.18
RLIM-202ENST00000349225 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
RLIM-202ENST00000349225 EBAG9O00559 213 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 NAA15Q9BXJ9 866 aaKnown RBP16.17■□□□□ 0.18
RLIM-202ENST00000349225 SCP2P22307 547 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 TUBB4BP68371 445 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 CD248Q9HCU0 757 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 SERTAD1Q9UHV2 236 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 SETD1BQ9UPS6 1966 aaKnown RBP16.17■□□□□ 0.18
RLIM-202ENST00000349225 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 RXRAP19793 462 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 KRT40Q6A162 431 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
RLIM-202ENST00000349225 SELENOOQ9BVL4 669 aa16.17■□□□□ 0.18
RLIM-202ENST00000349225 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
RLIM-202ENST00000349225 HEG1Q9ULI3 1381 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
RLIM-202ENST00000349225 PRC1O43663 620 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 COBLO75128 1261 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 GPTP24298 496 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 STX17P56962 302 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 FAM76AQ8TAV0 307 aa16.16■□□□□ 0.18
RLIM-202ENST00000349225 INPP5BP32019 993 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 OSBP2Q969R2 916 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 TTF2Q9UNY4 1162 aaKnown RBP16.15■□□□□ 0.18
RLIM-202ENST00000349225 CAPN7Q9Y6W3 813 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 GOLGA6CA6NDK9 693 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 POLR2DO15514 142 aaKnown RBP16.15■□□□□ 0.18
RLIM-202ENST00000349225 ATP1A1P05023 1023 aaKnown RBP16.15■□□□□ 0.18
RLIM-202ENST00000349225 GOLGA6DP0CG33 693 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 NLRP6P59044 892 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 GCKRQ14397 625 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 PHKBQ93100 1093 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 RRP36Q96EU6 259 aaKnown RBP16.15■□□□□ 0.18
RLIM-202ENST00000349225 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 GOLGA6AQ9NYA3 693 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 DIP2AQ14689 1571 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 CASP1P29466 404 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 TTC39AQ5SRH9 613 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
RLIM-202ENST00000349225 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms