RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 CNGA4Q8IV77 575 aa20.88■□□□□ 0.93
UBE3C-201ENST00000348165 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
UBE3C-201ENST00000348165 SLU7O95391 586 aaKnown RBP20.87■□□□□ 0.93
UBE3C-201ENST00000348165 GSTA5Q7RTV2 222 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 SDR42E1Q8WUS8 393 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 ZNF202O95125 648 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 NIM1KQ8IY84 436 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 SUPT20HQ8NEM7 779 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 FNBP1Q96RU3 617 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 RBSNQ9H1K0 784 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 PCCAP05165 728 aaPredicted RBP20.87■□□□□ 0.93
UBE3C-201ENST00000348165 MICALCLQ6ZW33 695 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 CMTR1Q8N1G2 835 aaKnown RBP20.87■□□□□ 0.93
UBE3C-201ENST00000348165 ERCC3P19447 782 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 RAD51AP2Q09MP3 1159 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 ME3Q16798 604 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 ARHGEF25Q86VW2 580 aa20.87■□□□□ 0.93
UBE3C-201ENST00000348165 PDE6AP16499 860 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 PPP2R5BQ15173 497 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 CSGALNACT2Q8N6G5 542 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 AKR1B15C9JRZ8 316 aaPredicted RBP20.86■□□□□ 0.93
UBE3C-201ENST00000348165 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 KRT25Q7Z3Z0 450 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 BAG1Q99933 345 aaPredicted RBP20.86■□□□□ 0.93
UBE3C-201ENST00000348165 GLT8D2Q9H1C3 349 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 CEP83Q9Y592 693 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 EPB41P11171 864 aaKnown RBP20.86■□□□□ 0.93
UBE3C-201ENST00000348165 USPL1Q5W0Q7 1092 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 DYMQ7RTS9 669 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 IGSF22Q8N9C0 903 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 GADD45BO75293 160 aaPredicted RBP20.86■□□□□ 0.93
UBE3C-201ENST00000348165 HERC4Q5GLZ8 1057 aaPredicted RBP20.86■□□□□ 0.93
UBE3C-201ENST00000348165 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 PPP1R14CQ8TAE6 165 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 ATP6V0A2Q9Y487 856 aa20.86■□□□□ 0.93
UBE3C-201ENST00000348165 A0A1W2PRG0 241 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 ARHGEF35A5YM69 484 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 CLSTN2Q9H4D0 955 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 RASAL2Q9UJF2 1139 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 CCDC122Q5T0U0 273 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 ZNF654Q8IZM8 581 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 GREM2Q9H772 168 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 BIN2Q9UBW5 565 aaPredicted RBP20.85■□□□□ 0.93
UBE3C-201ENST00000348165 SMTNP53814 917 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 TM6SF1Q9BZW5 370 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 TEKT1Q969V4 418 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
UBE3C-201ENST00000348165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.85■□□□□ 0.938e-8■□□□□ 8.8
UBE3C-201ENST00000348165 BAG6P46379 1132 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 PUS3Q9BZE2 481 aaKnown RBP20.84■□□□□ 0.93
UBE3C-201ENST00000348165 KIAA0825Q8IV33 1275 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 IVNS1ABPQ9Y6Y0 642 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.932e-8■■■□□ 16.4
UBE3C-201ENST00000348165 PDE6BP35913 854 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 TBC1D7Q9P0N9 293 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 KIF24Q5T7B8 1368 aa20.84■□□□□ 0.93
UBE3C-201ENST00000348165 SCNN1DP51172 638 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 SRRTQ9BXP5 876 aaKnown RBP20.83■□□□□ 0.93
UBE3C-201ENST00000348165 ZBTB1Q9Y2K1 713 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 HSPD1P10809 573 aaKnown RBP20.83■□□□□ 0.93
UBE3C-201ENST00000348165 PPP1R2P41236 205 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 CHRNDQ07001 517 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 FAM182BQ5T319 152 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.83■□□□□ 0.93
UBE3C-201ENST00000348165 ARPP21Q9UBL0 812 aaPredicted RBP20.83■□□□□ 0.93
UBE3C-201ENST00000348165 PALD1Q9ULE6 856 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 CETN3O15182 167 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 KRT5P13647 590 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 TSNARE1Q96NA8 513 aa20.83■□□□□ 0.93
UBE3C-201ENST00000348165 REXO1Q8N1G1 1221 aaKnown RBP20.83■□□□□ 0.92
UBE3C-201ENST00000348165 PAIP2Q9BPZ3 127 aaKnown RBP20.83■□□□□ 0.92
UBE3C-201ENST00000348165 BCS1LQ9Y276 419 aa20.83■□□□□ 0.92
UBE3C-201ENST00000348165 PRAMEF22A3QJZ6 481 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 RHOXF2BP0C7M4 288 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 ADD1P35611 737 aaKnown RBP20.82■□□□□ 0.92
UBE3C-201ENST00000348165 GOLGA1Q92805 767 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 RHOXF2Q9BQY4 288 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 MAGI2Q86UL8 1455 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 PLXNC1O60486 1568 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 NOP56O00567 594 aaKnown RBP20.82■□□□□ 0.92
UBE3C-201ENST00000348165 CRKLP46109 303 aaKnown RBP20.82■□□□□ 0.92
UBE3C-201ENST00000348165 LZTS2Q9BRK4 669 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 ZBED4O75132 1171 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 TUBB4AP04350 444 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 CALCRLQ16602 461 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 GPIHBP1Q8IV16 184 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 HAUS7Q99871 368 aa20.82■□□□□ 0.92
UBE3C-201ENST00000348165 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 FGAP02671 866 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 PHKA1P46020 1223 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 KCNQ4P56696 695 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 FANCCQ00597 558 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 WDR44Q5JSH3 913 aa20.81■□□□□ 0.92
UBE3C-201ENST00000348165 GTF3C6Q969F1 213 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms