RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF3-201ENST00000347662 HS2ST1Q7LGA3 356 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 C10orf67Q8IYJ2 551 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 ANKRD35Q8N283 1001 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 STK25O00506 426 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-201ENST00000347662 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAF3-201ENST00000347662 TRAF1Q13077 416 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 RILPQ96NA2 401 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 KRT3P12035 628 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 LMNTD2Q8IXW0 634 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-201ENST00000347662 MCM4P33991 863 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 GBP6Q6ZN66 633 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 EBAG9O00559 213 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
TRAF3-201ENST00000347662 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
TRAF3-201ENST00000347662 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 CASP2P42575 452 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ITKQ08881 620 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ZNF594Q96JF6 807 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 UBXN1Q04323 297 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 PALM3A6NDB9 673 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 IGHDP01880 384 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ATICP31939 592 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 PSMA7O14818 248 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 SPOPO43791 374 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 RNF8O76064 485 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ZNF569Q5MCW4 686 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ZMAT2Q96NC0 199 aaKnown RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 TAF5LO75529 589 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 ITGA6P23229 1130 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 KRT23Q9C075 422 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 SDSP20132 328 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 TNNI2P48788 182 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 RTN1Q16799 776 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
TRAF3-201ENST00000347662 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
TRAF3-201ENST00000347662 HAUS8Q9BT25 410 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 FOXD4Q12950 439 aaPredicted RBP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 PLIN2Q99541 437 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 TRIM56Q9BRZ2 755 aaKnown RBP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 TRIM37O94972 964 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 M0QZ92 97 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 PHEXP78562 749 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 TCP10Q12799 353 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 SLC9A5Q14940 896 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
TRAF3-201ENST00000347662 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 USTQ9Y2C2 406 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
TRAF3-201ENST00000347662 GOLGA6CA6NDK9 693 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GOLGA6DP0CG33 693 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 TTC22Q5TAA0 569 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GOLGA6AQ9NYA3 693 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
TRAF3-201ENST00000347662 I3L4J1 428 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 DCLK2Q8N568 766 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 MIER3Q7Z3K6 550 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 VCX3AQ9NNX9 186 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 COG7P83436 770 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 IFRD2Q12894 506 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-201ENST00000347662 ZBTB41Q5SVQ8 909 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 G2E3Q7L622 706 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
TRAF3-201ENST00000347662 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GSTA1P08263 222 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 GSTA2P09210 222 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 RXRAP19793 462 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 KRT86O43790 486 aa13.12□□□□□ -0.31
TRAF3-201ENST00000347662 PLCG2P16885 1265 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms