RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PTPDC1A2A3K4 754 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 RANBP6O60518 1105 aaKnown RBP25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 DTNBO60941 627 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 POLR3DP05423 398 aaPredicted RBP25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 SCNN1DP51172 638 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 SYNE3Q6ZMZ3 975 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 FAM184AQ8NB25 1140 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 MTMR6Q9Y217 621 aa25.16■■□□□ 1.62
TSPAN3-202ENST00000346495 PSDA5PKW4 1024 aaPredicted RBP25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 ZBTB43O43298 467 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 IQCA1Q86XH1 822 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 ZKSCAN3Q9BRR0 538 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 SENP2Q9HC62 589 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 SLC12A7Q9Y666 1083 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 ADAMTSL1Q8N6G6 1762 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 ECM29Q5VYK3 1845 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 PRDM1O75626 825 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 CRKP46108 304 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 METAP2P50579 478 aaKnown RBP eCLIP25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 LARGE2Q8N3Y3 721 aa25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 PPP1R1BQ9UD71 204 aaPredicted RBP25.15■■□□□ 1.62
TSPAN3-202ENST00000346495 YDJCA8MPS7 323 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 CPLX1O14810 134 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 F13A1P00488 732 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 EVX2Q03828 476 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 KIAA0825Q8IV33 1275 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 DDX11Q96FC9 970 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 ZDHHC15Q96MV8 337 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 ZSCAN10Q96SZ4 725 aaPredicted RBP25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 ZNF277Q9NRM2 450 aaPredicted RBP25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 SAP30BPQ9UHR5 308 aaKnown RBP25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 ATP6V1DQ9Y5K8 247 aa25.14■■□□□ 1.61
TSPAN3-202ENST00000346495 TNKSO95271 1327 aa25.13■■□□□ 1.61
TSPAN3-202ENST00000346495 VPS37CA5D8V6 355 aaPredicted RBP25.13■■□□□ 1.61
TSPAN3-202ENST00000346495 SEC23AQ15436 765 aa25.13■■□□□ 1.61
TSPAN3-202ENST00000346495 MCTP1Q6DN14 999 aa25.13■■□□□ 1.61
TSPAN3-202ENST00000346495 USP40Q9NVE5 1235 aa25.13■■□□□ 1.61
TSPAN3-202ENST00000346495 FER1L6Q2WGJ9 1857 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 PTGER2P43116 358 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 RCAN1P53805 252 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 CPLX2Q6PUV4 134 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 RAB11FIP4Q86YS3 637 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 ZNF287Q9HBT7 754 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 NID2Q14112 1375 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 MYO3BQ8WXR4 1341 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 GOLGA8AA7E2F4 631 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 SLC4A8Q2Y0W8 1093 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 APOBEC3HQ6NTF7 200 aaKnown RBP25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 MICU3Q86XE3 530 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 SERPINA10Q9UK55 444 aa25.12■■□□□ 1.61
TSPAN3-202ENST00000346495 CDKL5O76039 1030 aa25.11■■□□□ 1.61
TSPAN3-202ENST00000346495 PLCD1P51178 756 aa25.11■■□□□ 1.61
TSPAN3-202ENST00000346495 CDC42EP5Q6NZY7 148 aa25.11■■□□□ 1.61
TSPAN3-202ENST00000346495 KLHL34Q8N239 644 aa25.11■■□□□ 1.61
TSPAN3-202ENST00000346495 MKNK2Q9HBH9 465 aa25.11■■□□□ 1.61
TSPAN3-202ENST00000346495 TSPY2A6NKD2 308 aa25.1■■□□□ 1.61
TSPAN3-202ENST00000346495 IARSP41252 1262 aaKnown RBP25.1■■□□□ 1.61
TSPAN3-202ENST00000346495 ENAHQ8N8S7 591 aaPredicted RBP25.1■■□□□ 1.61
TSPAN3-202ENST00000346495 DYNLL2Q96FJ2 89 aa25.1■■□□□ 1.61
TSPAN3-202ENST00000346495 WDHD1O75717 1129 aaPredicted RBP25.09■■□□□ 1.61
TSPAN3-202ENST00000346495 IFIT1BQ5T764 474 aaKnown RBP25.09■■□□□ 1.61
TSPAN3-202ENST00000346495 NIM1KQ8IY84 436 aa25.09■■□□□ 1.61
TSPAN3-202ENST00000346495 COL4A5P29400 1685 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 H3BQV1 296 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 IFFO2Q5TF58 517 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 C16orf86Q6ZW13 317 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 CDC37L1Q7L3B6 337 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 TTC6Q86TZ1 520 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 ZNF654Q8IZM8 581 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 TAOK3Q9H2K8 898 aa25.08■■□□□ 1.61
TSPAN3-202ENST00000346495 RXRAP19793 462 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 PICALMQ13492 652 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 CCDC178Q5BJE1 867 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 FAM47AQ5JRC9 791 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 RSBN1LQ6PCB5 846 aaPredicted RBP25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 ZNF444Q8N0Y2 327 aaPredicted RBP25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 MYL10Q9BUA6 226 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 ZNRF3Q9ULT6 936 aa25.08■■□□□ 1.6
TSPAN3-202ENST00000346495 TRAK2O60296 914 aa25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 VIL1P09327 827 aaKnown RBP25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 CDC27P30260 824 aa25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 ADD1P35611 737 aaKnown RBP25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 RBM5P52756 815 aaKnown RBP eCLIP25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 PPP2R5BQ15173 497 aa25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 SKOR2Q2VWA4 1001 aaPredicted RBP25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 ORC3Q9UBD5 711 aaPredicted RBP25.07■■□□□ 1.6
TSPAN3-202ENST00000346495 CCDC196A0A1B0GTZ2 297 aa25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 FDPSP14324 419 aaKnown RBP25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 TFAP4Q01664 338 aa25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 RTN1Q16799 776 aa25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 CATIPQ7Z7H3 387 aa25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 CCDC144CPQ8IYA2 1237 aa25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 DDX4Q9NQI0 724 aaKnown RBP25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 FAM217BQ9NTX9 383 aaPredicted RBP25.06■■□□□ 1.6
TSPAN3-202ENST00000346495 RAD17O75943 681 aa25.05■■□□□ 1.6
TSPAN3-202ENST00000346495 CALM1P0DP23 149 aa25.05■■□□□ 1.6
TSPAN3-202ENST00000346495 CALM2P0DP24 149 aa25.05■■□□□ 1.6
TSPAN3-202ENST00000346495 CALM3P0DP25 149 aa25.05■■□□□ 1.6
TSPAN3-202ENST00000346495 CDK8P49336 464 aa25.05■■□□□ 1.6
TSPAN3-202ENST00000346495 OSBPL5Q9H0X9 879 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms