RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 KBTBD3Q8NAB2 608 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 DBNDD2Q9BQY9 259 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 ZKSCAN3Q9BRR0 538 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 SPTLC3Q9NUV7 552 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 NELFBQ8WX92 580 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 DCAF17Q5H9S7 520 aaPredicted RBP19.48■□□□□ 0.71
SPAST-202ENST00000345662 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 CCDC65Q8IXS2 484 aa19.48■□□□□ 0.71
SPAST-202ENST00000345662 RRP36Q96EU6 259 aaKnown RBP19.48■□□□□ 0.71
SPAST-202ENST00000345662 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 A2MP01023 1474 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 NOL3O60936 208 aaKnown RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 CUL4AQ13619 759 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 IQCDQ96DY2 449 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 HAUS4Q9H6D7 363 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 BABAM1Q9NWV8 329 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 IQSEC3Q9UPP2 1182 aaPredicted RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 ZPR1O75312 459 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 IL13P35225 146 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 ATP1A2P50993 1020 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 PPARDQ03181 441 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 PAXIP1Q6ZW49 1069 aaPredicted RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 RNF10Q8N5U6 811 aaKnown RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 MCUR1Q96AQ8 359 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 RIPOR2Q9Y4F9 1068 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 TRAPPC8Q9Y2L5 1435 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 RPS6KA1Q15418 735 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.47■□□□□ 0.71
SPAST-202ENST00000345662 ARHGEF2Q92974 986 aaKnown RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 BICD1Q96G01 975 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 A0A087WUV0 522 aaPredicted RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 TTC38Q5R3I4 469 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 RPAINQ86UA6 219 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
SPAST-202ENST00000345662 SERTAD1Q9UHV2 236 aa19.47■□□□□ 0.71
SPAST-202ENST00000345662 HGSO14964 777 aaPredicted RBP19.46■□□□□ 0.71
SPAST-202ENST00000345662 CMA1P23946 247 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 CLCN6P51797 869 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 CFAP57Q96MR6 1250 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 EYA1Q99502 592 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 FANCLQ9NW38 375 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 ANAPC4Q9UJX5 808 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.46■□□□□ 0.71
SPAST-202ENST00000345662 SYNCQ9H7C4 482 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 JRKLQ9Y4A0 524 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 FANCAO15360 1455 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 CTNNA1P35221 906 aaKnown RBP19.46■□□□□ 0.71
SPAST-202ENST00000345662 TNNI2P48788 182 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 HNRNPH2P55795 449 aaKnown RBP19.46■□□□□ 0.71
SPAST-202ENST00000345662 LRCH2Q5VUJ6 765 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 VCX3BQ9H321 246 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 FAM13AO94988 1023 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 APPBP2Q92624 585 aa19.46■□□□□ 0.71
SPAST-202ENST00000345662 PTH1RQ03431 593 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 GKAP1Q5VSY0 366 aaPredicted RBP19.45■□□□□ 0.7
SPAST-202ENST00000345662 MIGA1Q8NAN2 632 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 DDX21Q9NR30 783 aaKnown RBP eCLIP19.45■□□□□ 0.7
SPAST-202ENST00000345662 SPOPO43791 374 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 HLA-DOAP06340 250 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 TIMM10P62072 90 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 PIK3AP1Q6ZUJ8 805 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 ABCC1P33527 1531 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 CCDC151A5D8V7 595 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 ZNF131P52739 623 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 SNCBQ16143 134 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 FBXO38Q6PIJ6 1188 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 APBB1IPQ7Z5R6 666 aaPredicted RBP19.45■□□□□ 0.7
SPAST-202ENST00000345662 ARHGAP24Q8N264 748 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 PCDHA7Q9UN72 937 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 HYOU1Q9Y4L1 999 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 GUCY2FP51841 1108 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 UBL4BQ8N7F7 174 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 PHKBQ93100 1093 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 ZNF274Q96GC6 653 aaPredicted RBP19.45■□□□□ 0.7
SPAST-202ENST00000345662 POGZQ7Z3K3 1410 aa19.45■□□□□ 0.7
SPAST-202ENST00000345662 APBA1Q02410 837 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 TACO1Q9BSH4 297 aaKnown RBP19.44■□□□□ 0.7
SPAST-202ENST00000345662 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
SPAST-202ENST00000345662 TRIML1Q8N9V2 468 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 VEZTQ9HBM0 779 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 NUTM2BA6NNL0 878 aaPredicted RBP19.44■□□□□ 0.7
SPAST-202ENST00000345662 NUTM2EB1AL46 878 aaPredicted RBP19.44■□□□□ 0.7
SPAST-202ENST00000345662 KIF3CO14782 793 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 MBD4O95243 580 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 HOXB7P09629 217 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 TNFAIP3P21580 790 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 FAN1Q9Y2M0 1017 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.44■□□□□ 0.7
SPAST-202ENST00000345662 USP19O94966 1318 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 LETM2Q2VYF4 491 aa19.44■□□□□ 0.7
SPAST-202ENST00000345662 E7EWF7 191 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 PFKFB2O60825 505 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 NCBP1Q09161 790 aaKnown RBP19.43■□□□□ 0.7
SPAST-202ENST00000345662 CLUL1Q15846 466 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 CERS3Q8IU89 383 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 CSRNP2Q9H175 543 aa19.43■□□□□ 0.7
SPAST-202ENST00000345662 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
SPAST-202ENST00000345662 EPB41P11171 864 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms