RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 ADGRA2Q96PE1 1338 aa17.62■□□□□ 0.41
HMGN3-202ENST00000344726 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
HMGN3-202ENST00000344726 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
HMGN3-202ENST00000344726 PPP4CP60510 307 aa17.61■□□□□ 0.41
HMGN3-202ENST00000344726 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
HMGN3-202ENST00000344726 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
HMGN3-202ENST00000344726 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
HMGN3-202ENST00000344726 MYH7P12883 1935 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 BRCA2P51587 3418 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 TLR2O60603 784 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
HMGN3-202ENST00000344726 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
HMGN3-202ENST00000344726 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 ZCCHC17Q9NP64 241 aaKnown RBP17.6■□□□□ 0.41
HMGN3-202ENST00000344726 ZHX2Q9Y6X8 837 aa17.6■□□□□ 0.41
HMGN3-202ENST00000344726 PDHXO00330 501 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 TBC1D12O60347 775 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 IGSF3O75054 1194 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
HMGN3-202ENST00000344726 CYP7A1P22680 504 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 CTGFP29279 349 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 MAGEB6Q8N7X4 407 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
HMGN3-202ENST00000344726 EFCC1Q9HA90 598 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
HMGN3-202ENST00000344726 FLT1P17948 1338 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 CXCL11O14625 94 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
HMGN3-202ENST00000344726 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.4
HMGN3-202ENST00000344726 BAG3O95817 575 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 C17orf99Q6UX52 265 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 MAPKAPK5Q8IW41 473 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.58■□□□□ 0.4
HMGN3-202ENST00000344726 DNAJC18Q9H819 358 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 CPA4Q9UI42 421 aa17.58■□□□□ 0.4
HMGN3-202ENST00000344726 A0A0G2JLL6 359 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-202ENST00000344726 PRRT2Q7Z6L0 340 aaPredicted RBP17.57■□□□□ 0.4
HMGN3-202ENST00000344726 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
HMGN3-202ENST00000344726 EDC3Q96F86 508 aaKnown RBP17.57■□□□□ 0.4
HMGN3-202ENST00000344726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.4
HMGN3-202ENST00000344726 PICK1Q9NRD5 415 aa17.57■□□□□ 0.4
HMGN3-202ENST00000344726 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
HMGN3-202ENST00000344726 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
HMGN3-202ENST00000344726 CYP2C8P10632 490 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 PLCG2P16885 1265 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 JAG1P78504 1218 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 LACTBP83111 547 aaPredicted RBP17.56■□□□□ 0.4
HMGN3-202ENST00000344726 MAP3K12Q12852 859 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 SHROOM1Q2M3G4 852 aaPredicted RBP17.56■□□□□ 0.4
HMGN3-202ENST00000344726 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
HMGN3-202ENST00000344726 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 PTCH2Q9Y6C5 1203 aa17.56■□□□□ 0.4
HMGN3-202ENST00000344726 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
HMGN3-202ENST00000344726 NAV1Q8NEY1 1877 aa17.55■□□□□ 0.4
HMGN3-202ENST00000344726 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
HMGN3-202ENST00000344726 GOLIM4O00461 696 aa17.55■□□□□ 0.4
HMGN3-202ENST00000344726 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
HMGN3-202ENST00000344726 PDE6AP16499 860 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 ATP5JP18859 108 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 TTF1Q15361 905 aaPredicted RBP17.54■□□□□ 0.4
HMGN3-202ENST00000344726 SLC4A8Q2Y0W8 1093 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 BOLA2Q9H3K6 86 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
HMGN3-202ENST00000344726 PALD1Q9ULE6 856 aa17.54■□□□□ 0.4
HMGN3-202ENST00000344726 POTEFA5A3E0 1075 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 BCRP11274 1271 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 CAP2P40123 477 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 METTL16Q86W50 562 aaKnown RBP17.53■□□□□ 0.4
HMGN3-202ENST00000344726 ARMC5Q96C12 935 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
HMGN3-202ENST00000344726 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
HMGN3-202ENST00000344726 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
HMGN3-202ENST00000344726 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
HMGN3-202ENST00000344726 TCRBV5S4A2TA0A5A2 114 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 HAUS7Q99871 368 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 PAG1Q9NWQ8 432 aa17.52■□□□□ 0.4
HMGN3-202ENST00000344726 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.4
HMGN3-202ENST00000344726 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
HMGN3-202ENST00000344726 CHGBP05060 677 aa17.51■□□□□ 0.39
HMGN3-202ENST00000344726 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
HMGN3-202ENST00000344726 FASTKD5Q7L8L6 764 aaKnown RBP17.51■□□□□ 0.39
HMGN3-202ENST00000344726 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
HMGN3-202ENST00000344726 MGAMO43451 1857 aa17.5■□□□□ 0.39
HMGN3-202ENST00000344726 SPP2Q13103 211 aa17.5■□□□□ 0.39
HMGN3-202ENST00000344726 ZNF333Q96JL9 665 aa17.5■□□□□ 0.39
HMGN3-202ENST00000344726 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
HMGN3-202ENST00000344726 MKI67P46013 3256 aaKnown RBP17.5■□□□□ 0.39
HMGN3-202ENST00000344726 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
HMGN3-202ENST00000344726 GDF11O95390 407 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms