RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CDC42-202ENST00000344548 TTF2Q9UNY4 1162 aaKnown RBP15.9■□□□□ 0.14
CDC42-202ENST00000344548 ATF5Q9Y2D1 282 aaPredicted RBP15.9■□□□□ 0.14
CDC42-202ENST00000344548 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
CDC42-202ENST00000344548 LAMB1P07942 1786 aa15.9■□□□□ 0.14
CDC42-202ENST00000344548 CAVIN1Q6NZI2 390 aaKnown RBP15.89■□□□□ 0.13
CDC42-202ENST00000344548 ORC3Q9UBD5 711 aaPredicted RBP15.89■□□□□ 0.13
CDC42-202ENST00000344548 TAOK2Q9UL54 1235 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 CPLX1O14810 134 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 TEX11Q8IYF3 940 aa15.89■□□□□ 0.13
CDC42-202ENST00000344548 ZSCAN10Q96SZ4 725 aaPredicted RBP15.89■□□□□ 0.13
CDC42-202ENST00000344548 G3V3G9 751 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 H3BQV1 296 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 ECE2O60344 883 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 IFFO2Q5TF58 517 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
CDC42-202ENST00000344548 EYA3Q99504 573 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 UBAC1Q9BSL1 405 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 TMEM63CQ9P1W3 806 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 FLT1P17948 1338 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 ORC4O43929 436 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 PODNQ7Z5L7 613 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 TTC6Q86TZ1 520 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 CCDC82Q8N4S0 544 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 TMEM87AQ8NBN3 555 aa15.88■□□□□ 0.13
CDC42-202ENST00000344548 FTOQ9C0B1 505 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDC42-202ENST00000344548 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
CDC42-202ENST00000344548 YDJCA8MPS7 323 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 IGSF3O75054 1194 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 SLURP2P0DP57 97 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 ZNF654Q8IZM8 581 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 NUP133Q8WUM0 1156 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
CDC42-202ENST00000344548 SRCAPQ6ZRS2 3230 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 DHX16O60231 1041 aaKnown RBP15.87■□□□□ 0.13
CDC42-202ENST00000344548 PTMSP20962 102 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 GUCY1A2P33402 732 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 IL17RBQ9NRM6 502 aa15.87■□□□□ 0.13
CDC42-202ENST00000344548 ZNF646O15015 1829 aaPredicted RBP15.87■□□□□ 0.13
CDC42-202ENST00000344548 NAV1Q8NEY1 1877 aa15.86■□□□□ 0.13
CDC42-202ENST00000344548 ERICH2A1L162 156 aa15.86■□□□□ 0.13
CDC42-202ENST00000344548 SART3Q15020 963 aaKnown RBP15.86■□□□□ 0.13
CDC42-202ENST00000344548 RCSD1Q6JBY9 416 aa15.86■□□□□ 0.13
CDC42-202ENST00000344548 APOBEC3HQ6NTF7 200 aaKnown RBP15.86■□□□□ 0.13
CDC42-202ENST00000344548 TTLL6Q8N841 843 aa15.86■□□□□ 0.13
CDC42-202ENST00000344548 ATP6V1DQ9Y5K8 247 aa15.86■□□□□ 0.13
CDC42-202ENST00000344548 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
CDC42-202ENST00000344548 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 PICALMQ13492 652 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 DDX60LQ5H9U9 1706 aaKnown RBP15.85■□□□□ 0.13
CDC42-202ENST00000344548 COL4A5P29400 1685 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 TFAP4Q01664 338 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 FANCBQ8NB91 859 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 FBXO18Q8NFZ0 1043 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 MTA3Q9BTC8 594 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
CDC42-202ENST00000344548 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 TROAPQ12815 778 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 RTN1Q16799 776 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 IFIT1BQ5T764 474 aaKnown RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 SUGT1Q9Y2Z0 365 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 NID2Q14112 1375 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 ROBO3Q96MS0 1386 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 TSPY2A6NKD2 308 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 PPIP5K2O43314 1243 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 PCP11498 1178 aaKnown RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 PDIA4P13667 645 aaKnown RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 CACNB3P54284 484 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 CEBPZQ03701 1054 aaKnown RBP15.84■□□□□ 0.13
CDC42-202ENST00000344548 PDE4BQ07343 736 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 NFIAQ12857 509 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 CDC42EP5Q6NZY7 148 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 IQCA1Q86XH1 822 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 ZFPM1Q8IX07 1006 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 SLC26A6Q9BXS9 759 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 ECM29Q5VYK3 1845 aa15.84■□□□□ 0.13
CDC42-202ENST00000344548 hCG_1642624A0A1W2PR95 340 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 FSD2A1L4K1 749 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 RASA1P20936 1047 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.13
CDC42-202ENST00000344548 KRT85P78386 507 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 ZSCAN23Q3MJ62 389 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 TMTC2Q8N394 836 aa15.83■□□□□ 0.13
CDC42-202ENST00000344548 ALG1Q9BT22 464 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms