RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 GNAT2P19087 354 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 INPP5BP32019 993 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PPIL2Q13356 520 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 GIMAP6Q6P9H5 292 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SCYL3Q8IZE3 742 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 OSBP2Q969R2 916 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 STRBPQ96SI9 672 aaKnown RBP15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ARMT1Q9H993 441 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 GINM1Q9NU53 330 aa15.74■□□□□ 0.11
HLA-DQA1-201ENST00000343139 GJA5P36382 358 aa15.73■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ZMYM1Q5SVZ6 1142 aa15.73■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CENPQQ7L2Z9 268 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQA1-201ENST00000343139 TBC1D2Q9BYX2 928 aa15.73■□□□□ 0.11
HLA-DQA1-201ENST00000343139 FOCADQ5VW36 1801 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CHGBP05060 677 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 NEFLP07196 543 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 GTF2A2P52657 109 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ERICH6BQ5W0A0 696 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MS4A4AQ96JQ5 239 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CFHR5Q9BXR6 569 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
HLA-DQA1-201ENST00000343139 ALDH1A1P00352 501 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PDE4AP27815 886 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CAP2P40123 477 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CTCFP49711 727 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CRACR2BQ8N4Y2 399 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SDR42E1Q8WUS8 393 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 DNAJC18Q9H819 358 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 PICK1Q9NRD5 415 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 MCM9Q9NXL9 1143 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 KCNH4Q9UQ05 1017 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 OTOFQ9HC10 1997 aa15.71■□□□□ 0.11
HLA-DQA1-201ENST00000343139 CXCL11O14625 94 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 FOXN1O15353 648 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 GPAA1O43292 621 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PTPRAP18433 802 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 GABPAQ06546 454 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 OTUD5Q96G74 571 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SLC4A4Q9Y6R1 1079 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 IRF6O14896 467 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PRKAB2O43741 272 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 POLR3DP05423 398 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 OTUD7BQ6GQQ9 843 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 AMOTL1Q8IY63 956 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 RNF186Q9NXI6 227 aa15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
HLA-DQA1-201ENST00000343139 LAMB1P07942 1786 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 GSG1L2A8MUP6 293 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ASNSP08243 561 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CETPP11597 493 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PLCD1P51178 756 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 MKRN3Q13064 507 aaKnown RBP15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SBK1Q52WX2 424 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 NOM1Q5C9Z4 860 aaKnown RBP15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 DDX60LQ5H9U9 1706 aaKnown RBP15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
HLA-DQA1-201ENST00000343139 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PATL2C9JE40 543 aaKnown RBP15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 M0R2C6 588 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 HIP1O00291 1037 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SLURP2P0DP57 97 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 AFG3L2Q9Y4W6 797 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 MYH7P12883 1935 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CDK5RAP2Q96SN8 1893 aa15.68■□□□□ 0.1
HLA-DQA1-201ENST00000343139 HSPA8P11142 646 aaKnown RBP15.67■□□□□ 0.1
HLA-DQA1-201ENST00000343139 NACAP1Q9BZK3 213 aa15.67■□□□□ 0.1
HLA-DQA1-201ENST00000343139 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SIPA1L1O43166 1804 aa15.67■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 USP17L5A8MUK1 530 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 USP17L12C9JPN9 530 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 USP17L21D6R901 530 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CCL15Q16663 113 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 CTR9Q6PD62 1173 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 BRI3BPQ8WY22 251 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 RILPL2Q969X0 211 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SEC62Q99442 399 aaKnown RBP15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 PTPN18Q99952 460 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 AK9Q5TCS8 1911 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 A0A0G2JLL6 359 aaPredicted RBP15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 TRPA1O75762 1119 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SDSP20132 328 aa15.66■□□□□ 0.1
HLA-DQA1-201ENST00000343139 SHMT1P34896 483 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms