RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 WNT7AO00755 349 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 CUTAO60888 179 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 GUCY1A2P33402 732 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 ZNF165P49910 485 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 LCORLQ8N3X6 602 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 RNF26Q9BY78 433 aaPredicted RBP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 H2AFXP16104 143 aaPredicted RBP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 UBE4AQ14139 1066 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 SRPRBQ9Y5M8 271 aaKnown RBP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 LRRC37A2A6NM11 1700 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 ZNF202O95125 648 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 IL17AQ16552 155 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 KRT40Q6A162 431 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 AMIGO3Q86WK7 504 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 CCAR2Q8N163 923 aaKnown RBP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 CNNM2Q9H8M5 875 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 GJB4Q9NTQ9 266 aa9.42□□□□□ -0.9
CFAP54-201ENST00000342887 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
CFAP54-201ENST00000342887 SPTLC2O15270 562 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 PRPF3O43395 683 aaKnown RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 MCCD1P59942 119 aaPredicted RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 LRMPQ12912 555 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 CRY2Q49AN0 593 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 C17orf53Q8N3J3 647 aaPredicted RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 RLFQ13129 1914 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 ARID2Q68CP9 1835 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 KLF18A0A0U1RQI7 1052 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 TUBB4AP04350 444 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 PDE4BQ07343 736 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 MSL3Q8N5Y2 521 aaKnown RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 MTRQ99707 1265 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 STK3Q13188 491 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
CFAP54-201ENST00000342887 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 AIFM3Q96NN9 605 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
CFAP54-201ENST00000342887 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 ADAMTS3O15072 1205 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 VPS72Q15906 364 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 KRBA2Q6ZNG9 492 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 VSTM4Q8IW00 320 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 ZNF213O14771 459 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 SIK1P57059 783 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 NOSTRINQ8IVI9 506 aa9.4□□□□□ -0.9
CFAP54-201ENST00000342887 SECISBP2LQ93073 1101 aaKnown RBP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 CCDC94Q9BW85 323 aaPredicted RBP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 R3HCC1Q9Y3T6 440 aaKnown RBP9.4□□□□□ -0.9
CFAP54-201ENST00000342887 LCTP09848 1927 aa9.4□□□□□ -0.91
CFAP54-201ENST00000342887 A0A1B0GTH6 734 aa9.4□□□□□ -0.91
CFAP54-201ENST00000342887 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.91
CFAP54-201ENST00000342887 NR1I3Q14994 352 aa9.4□□□□□ -0.91
CFAP54-201ENST00000342887 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.91
CFAP54-201ENST00000342887 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.91
CFAP54-201ENST00000342887 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 NCLP19338 710 aaKnown RBP9.39□□□□□ -0.91
CFAP54-201ENST00000342887 GRIN1Q05586 938 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 CHRNDQ07001 517 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 DPYDQ12882 1025 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
CFAP54-201ENST00000342887 SLC9C2Q5TAH2 1124 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 LRRC15Q8TF66 581 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 IQSEC3Q9UPP2 1182 aaPredicted RBP9.39□□□□□ -0.91
CFAP54-201ENST00000342887 PAXBP1Q9Y5B6 917 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
CFAP54-201ENST00000342887 IGKV6D-41A0A0C4DH26 115 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 SMIM22K7EJ46 135 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 DDAH1O94760 285 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 ZRANB2O95218 330 aaKnown RBP eCLIP9.39□□□□□ -0.91
CFAP54-201ENST00000342887 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 PPP4CP60510 307 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 CAMK4Q16566 473 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 KRT23Q9C075 422 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 KIF3AQ9Y496 699 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 FLT1P17948 1338 aa9.39□□□□□ -0.91
CFAP54-201ENST00000342887 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 CHST3Q7LGC8 479 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 ENAHQ8N8S7 591 aaPredicted RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 ENOX1Q8TC92 643 aaKnown RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 CDC5LQ99459 802 aaKnown RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms