RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 ANKRD50Q9ULJ7 1429 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 CCDC18Q5T9S5 1454 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 PALM3A6NDB9 673 aaPredicted RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 USP27XA6NNY8 438 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 MEFVO15553 781 aaPredicted RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 WDHD1O75717 1129 aaPredicted RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 TMCC1O94876 653 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 IRF5Q13568 498 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 SNW1Q13573 536 aaKnown RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 NBPF14Q5TI25 921 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 LRRC8AQ8IWT6 810 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 SENP7Q9BQF6 1050 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 SYNCQ9H7C4 482 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 PLXNC1O60486 1568 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 SETD1BQ9UPS6 1966 aaKnown RBP9.25□□□□□ -0.93
CAST-204ENST00000341926 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
CAST-204ENST00000341926 TARSL2A2RTX5 802 aaKnown RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 GOLGA6L4A6NEF3 574 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 TBC1D12O60347 775 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 LUC7L3O95232 432 aaKnown RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 TROVE2P10155 538 aaKnown RBP eCLIP9.24□□□□□ -0.93
CAST-204ENST00000341926 USP5P45974 858 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 ZNF75DP51815 510 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 PKP1Q13835 747 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 SPDYCQ5MJ68 293 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 AFAP1L1Q8TED9 768 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 PMM1Q92871 262 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 CDK5RAP3Q96JB5 506 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 USP26Q9BXU7 913 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 IKBKGQ9Y6K9 419 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 SART1O43290 800 aaKnown RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 IL4RP24394 825 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 EVCP57679 992 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 NUCB1Q02818 461 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 NEK10Q6ZWH5 1172 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 ENOX1Q8TC92 643 aaKnown RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 NAP1L3Q99457 506 aaPredicted RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 TAOK3Q9H2K8 898 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 PLEKHA4Q9H4M7 779 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 RABEP2Q9H5N1 569 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 WDR35Q9P2L0 1181 aa9.24□□□□□ -0.93
CAST-204ENST00000341926 DENND4BO75064 1496 aaPredicted RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 NKTRP30414 1462 aaKnown RBP9.24□□□□□ -0.93
CAST-204ENST00000341926 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 LSM1O15116 133 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 SMIM24O75264 130 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 NPTXRO95502 500 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 HOXD12P35452 270 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 MATR3P43243 847 aaKnown RBP eCLIP9.23□□□□□ -0.93
CAST-204ENST00000341926 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 LRRC27Q9C0I9 530 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 GBP3Q9H0R5 595 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 FAM204AQ9H8W3 233 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 SLC40A1Q9NP59 571 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 GGA2Q9UJY4 613 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 TPCN1Q9ULQ1 816 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 DIS3Q9Y2L1 958 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 PARD3Q8TEW0 1356 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 ERBINQ96RT1 1412 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 RAPGEF2Q9Y4G8 1499 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 A0A1B0GVG6 124 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 A6NNZ2 444 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 POTEB2H3BUK9 544 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 BIN1O00499 593 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 TTI1O43156 1089 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 ZBED4O75132 1171 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 GFPT2O94808 682 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 FGFR1OPO95684 399 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 PDGFRBP09619 1106 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 ATP4AP20648 1035 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 COBLL1Q53SF7 1204 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 AGAP9Q5VTM2 703 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 RSRC2Q7L4I2 434 aaKnown RBP9.23□□□□□ -0.93
CAST-204ENST00000341926 LUZP1Q86V48 1076 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 SMARCC2Q8TAQ2 1214 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 OPTNQ96CV9 577 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 SSX2IPQ9Y2D8 614 aa9.23□□□□□ -0.93
CAST-204ENST00000341926 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
CAST-204ENST00000341926 E9PCH4 1651 aa9.22□□□□□ -0.93
CAST-204ENST00000341926 GPR75-ASB3A0A0A6YYF3 556 aa9.22□□□□□ -0.93
CAST-204ENST00000341926 FOSBP53539 338 aa9.22□□□□□ -0.93
CAST-204ENST00000341926 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
CAST-204ENST00000341926 INAQ16352 499 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms