RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 BLZF1Q9H2G9 400 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 WNK3Q9BYP7 1800 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MAP3K4Q9Y6R4 1608 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ATP7AQ04656 1500 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 BPIFA3Q9BQP9 254 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MLXIPLQ9NP71 852 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CDC45O75419 566 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ERBINQ96RT1 1412 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RAD54LQ92698 747 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TBATAQ96M53 351 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RIMS1Q86UR5 1692 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 DOCK8Q8NF50 2099 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 USP27XA6NNY8 438 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 MAP3K7CLP57077 242 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC150Q8NCX0 1101 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NEXMIFQ5QGS0 1516 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NACAE9PAV3 2078 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 ENDOUP21128 410 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TERF2Q15554 542 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC174Q6PII3 467 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TBC1D9Q6ZT07 1266 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TRIP13Q15645 432 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 SIX5Q8N196 739 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 PRDM4Q9UKN5 801 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NUTM2BA6NNL0 878 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NUTM2EB1AL46 878 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 NUTM2AQ8IVF1 878 aaPredicted RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TOPBP1Q92547 1522 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 RSRC1Q96IZ7 334 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC152Q4G0S7 254 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 LLPHQ9BRT6 129 aaKnown RBP3.98□□□□□ -1.77
SYNE1-201ENST00000341594 PLVAPQ9BX97 442 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 TNMDQ9H2S6 317 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 USP5P45974 858 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 CCHCR1Q8TD31 782 aa3.98□□□□□ -1.77
SYNE1-201ENST00000341594 FCHSD2O94868 740 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 PTPN14Q15678 1187 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ZNF569Q5MCW4 686 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 WAPLQ7Z5K2 1190 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 DAAM2Q86T65 1068 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 IFNKQ9P0W0 207 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 PRDM16Q9HAZ2 1276 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 RPAP1Q9BWH6 1393 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 FOXO6A8MYZ6 492 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 IFFO1Q0D2I5 559 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CAPN12Q6ZSI9 719 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 TBC1D22AQ8WUA7 517 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 FAM129AQ9BZQ8 928 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 STK25O00506 426 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 DPH6Q7L8W6 267 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 EHD4Q9H223 541 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 FANCLQ9NW38 375 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ZNF711Q9Y462 761 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 RGPD1P0DJD0 1748 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 KIF26BQ2KJY2 2108 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ANO6Q4KMQ2 910 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 MFSD4BQ5TF39 518 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 TSHZ1Q6ZSZ6 1077 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ABCC5O15440 1437 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CCDC114Q96M63 670 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 GUCA1BQ9UMX6 200 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CDC42BPGQ6DT37 1551 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CEP170BQ9Y4F5 1589 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 KDRP35968 1356 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 IFIT2P09913 472 aaKnown RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SLC8A3P57103 927 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 NOP9Q86U38 636 aaKnown RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CHORDC1Q9UHD1 332 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ARHGEF10O15013 1369 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 KIF5CO60282 957 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 MVPQ14764 893 aaKnown RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SARM1Q6SZW1 724 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ZC3H15Q8WU90 426 aaKnown RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 EXOC5O00471 708 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SEPT2Q15019 361 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ARFGAP2Q8N6H7 521 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SLC17A8Q8NDX2 589 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ATG3Q9NT62 314 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 MON2Q7Z3U7 1717 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ELF2Q15723 593 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CFAP70Q5T0N1 1121 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SYNE3Q6ZMZ3 975 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 DESI2Q9BSY9 194 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ZFYP08048 801 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 PPP4R4Q6NUP7 873 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 SKILP12757 684 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 HPDP32754 393 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 RANBP1P43487 201 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ZC4H2Q9NQZ6 224 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 ANAPC4Q9UJX5 808 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 CARMIL3Q8ND23 1372 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 MINDY4BA8MYZ0 360 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 BCL2L12Q9HB09 334 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 HYPKQ9NX55 129 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 POU5F1BQ06416 359 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 HDXQ7Z353 690 aa3.97□□□□□ -1.77
SYNE1-201ENST00000341594 S100BP04271 92 aaPredicted RBP3.97□□□□□ -1.77
SYNE1-201ENST00000341594 NBPF10Q6P3W6 841 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms