RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 LEKR1Q6ZMV7 388 aa9.15□□□□□ -0.94
NBR1-201ENST00000341165 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
NBR1-201ENST00000341165 LY9Q9HBG7 655 aa9.15□□□□□ -0.94
NBR1-201ENST00000341165 TCRBV5S4A2TA0A5A2 114 aa9.15□□□□□ -0.95
NBR1-201ENST00000341165 NT5C2P49902 561 aa9.15□□□□□ -0.95
NBR1-201ENST00000341165 FILIP1Q7Z7B0 1213 aa9.15□□□□□ -0.95
NBR1-201ENST00000341165 MIGA1Q8NAN2 632 aa9.15□□□□□ -0.95
NBR1-201ENST00000341165 BSDC1Q9NW68 430 aaPredicted RBP9.15□□□□□ -0.95
NBR1-201ENST00000341165 TUBB4AP04350 444 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 PFKFB1P16118 471 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 RXRAP19793 462 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 IGDCC4Q8TDY8 1250 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 PHKBQ93100 1093 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 ZSWIM5Q9P217 1185 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 TOM1O60784 492 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 SERPINC1P01008 464 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 SARNPP82979 210 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 CCDC178Q5BJE1 867 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 IFIT1BQ5T764 474 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 NOSTRINQ8IVI9 506 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 FOXP1Q9H334 677 aaPredicted RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 ABCA3Q99758 1704 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 NEDD4P46934 1319 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 NTSR2O95665 410 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 SFPQP23246 707 aaKnown RBP eCLIP9.14□□□□□ -0.95
NBR1-201ENST00000341165 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 PDE4BQ07343 736 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 C11orf57Q6ZUT1 292 aaPredicted RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 TEX2Q8IWB9 1127 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 CTCFLQ8NI51 663 aaPredicted RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 RANBP6O60518 1105 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 TPTE2Q6XPS3 522 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 NBPF5PQ86XG9 351 aaPredicted RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 CCDC112Q8NEF3 446 aa9.14□□□□□ -0.95
NBR1-201ENST00000341165 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
NBR1-201ENST00000341165 XIRP1Q702N8 1843 aaKnown RBP9.14□□□□□ -0.95
NBR1-201ENST00000341165 GSG1L2A8MUP6 293 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 IQCB1Q15051 598 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 DIS3L2Q8IYB7 885 aaKnown RBP9.13□□□□□ -0.95
NBR1-201ENST00000341165 FANCBQ8NB91 859 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 IKBKBO14920 756 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 SKILP12757 684 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 SF3B3Q15393 1217 aaKnown RBP9.13□□□□□ -0.95
NBR1-201ENST00000341165 PTPN14Q15678 1187 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 KCNH3Q9ULD8 1083 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 SPATA31A5Q5VU36 1347 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 SPATA31A7Q8IWB4 1347 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 FOXP2O15409 715 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 U2AF2P26368 475 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■■■□□ 17.2
NBR1-201ENST00000341165 KIF5BP33176 963 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
NBR1-201ENST00000341165 RNF26Q9BY78 433 aaPredicted RBP9.13□□□□□ -0.95
NBR1-201ENST00000341165 BIN1O00499 593 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 MMP1P03956 469 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 KRT2P35908 639 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 USP8P40818 1118 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 GSTO1P78417 241 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 ZNF287Q9HBT7 754 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 PYCARDQ9ULZ3 195 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 MYL5Q02045 173 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 MARCH10Q8NA82 808 aaPredicted RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 TOGARAM1Q9Y4F4 1720 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 CDC27P30260 824 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 HIBADHP31937 336 aaKnown RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 LRRC8AQ8IWT6 810 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 DYDC1Q8WWB3 177 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 ZSCAN10Q96SZ4 725 aaPredicted RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
NBR1-201ENST00000341165 EPB41L4AQ9HCS5 686 aaPredicted RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 IQSEC3Q9UPP2 1182 aaPredicted RBP9.12□□□□□ -0.95
NBR1-201ENST00000341165 KIF28PB7ZC32 967 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 DDAH1O94760 285 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 RPS8P62241 208 aaKnown RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ELOA2Q8IYF1 753 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 LDHCP07864 332 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 TMC6Q7Z403 805 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 CRACR2BQ8N4Y2 399 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 C16orf45Q96MC5 204 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 ZKSCAN3Q9BRR0 538 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 RTCBQ9Y3I0 505 aaKnown RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
NBR1-201ENST00000341165 SHANK3Q9BYB0 1731 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 AP5Z1O43299 807 aa9.11□□□□□ -0.95
NBR1-201ENST00000341165 PRKAB2O43741 272 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms