RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 LONRF3Q496Y0 759 aa10.73□□□□□ -0.69
TRERF1-201ENST00000340840 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
TRERF1-201ENST00000340840 DESI2Q9BSY9 194 aa10.73□□□□□ -0.69
TRERF1-201ENST00000340840 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRERF1-201ENST00000340840 MINDY4BA8MYZ0 360 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 WDHD1O75717 1129 aaPredicted RBP10.72□□□□□ -0.69
TRERF1-201ENST00000340840 ENOX1Q8TC92 643 aaKnown RBP10.72□□□□□ -0.69
TRERF1-201ENST00000340840 COL15A1P39059 1388 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 PCDH11XQ9BZA7 1347 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 PCDH11YQ9BZA8 1340 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 SH2B2O14492 632 aaPredicted RBP10.72□□□□□ -0.69
TRERF1-201ENST00000340840 ZNF532Q9HCE3 1301 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 BTBD18B2RXH4 712 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 IVLP07476 585 aa10.72□□□□□ -0.69
TRERF1-201ENST00000340840 TTF2Q9UNY4 1162 aaKnown RBP10.72□□□□□ -0.69
TRERF1-201ENST00000340840 TMEM232C9JQI7 657 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 MBD4O95243 580 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 UBE3CQ15386 1083 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 ZNF827Q17R98 1081 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 SHC4Q6S5L8 630 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 FBXL16Q8N461 479 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 DPF2Q92785 391 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 CABP5Q9NP86 173 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 NWD1Q149M9 1564 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 SYNRGQ9UMZ2 1314 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 G3V3G9 751 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 CYP27B1O15528 508 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 GNAT2P19087 354 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 PTPN21Q16825 1174 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 CATIPQ7Z7H3 387 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 KIAA1328Q86T90 577 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 NEK11Q8NG66 645 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 ST7Q9NRC1 585 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 MAN1B1Q9UKM7 699 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 KCNJ14Q9UNX9 436 aa10.71□□□□□ -0.69
TRERF1-201ENST00000340840 CCDC151A5D8V7 595 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 CAPN2P17655 700 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 ITGA6P23229 1130 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 ERCC5P28715 1186 aaPredicted RBP10.71□□□□□ -0.7
TRERF1-201ENST00000340840 PLCD1P51178 756 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 NCAPHQ15003 741 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 IQCA1Q86XH1 822 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 GNL3LQ9NVN8 582 aaKnown RBP10.71□□□□□ -0.7
TRERF1-201ENST00000340840 VPS18Q9P253 973 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.7
TRERF1-201ENST00000340840 PDE6AP16499 860 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 ADD2P35612 726 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 CRACR2AQ9BSW2 395 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 WWC3Q9ULE0 1092 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 PCCAP05165 728 aaPredicted RBP10.7□□□□□ -0.7
TRERF1-201ENST00000340840 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 IQCEQ6IPM2 695 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 SEPT12Q8IYM1 358 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 RGS22Q8NE09 1264 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 ESR2Q92731 530 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 CCDC51Q96ER9 411 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
TRERF1-201ENST00000340840 ERVV-2B6SEH9 535 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 RHOXF2BP0C7M4 288 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
TRERF1-201ENST00000340840 PI16Q6UXB8 463 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 SRGAP1Q7Z6B7 1085 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 TMTC1Q8IUR5 882 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 RUFY1Q96T51 708 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 RHOXF2Q9BQY4 288 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 PARD6BQ9BYG5 372 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
TRERF1-201ENST00000340840 CYP2C19P33261 490 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 RMND1Q9NWS8 449 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 ABCF2Q9UG63 623 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 ABCC12Q96J65 1359 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 IFNAR1P17181 557 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 EIF5P55010 431 aaKnown RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 HNRNPH2P55795 449 aaKnown RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 SPATA1Q5VX52 437 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 KRT27Q7Z3Y8 459 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 FOXP1Q9H334 677 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 CDC23Q9UJX2 597 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 CPDO75976 1380 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 IRS4O14654 1257 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
TRERF1-201ENST00000340840 KRT2P35908 639 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 LIFRP42702 1097 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 ANTXR2P58335 489 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 IQUBQ8NA54 791 aa10.69□□□□□ -0.7
TRERF1-201ENST00000340840 FHOD1Q9Y613 1164 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms