RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TAF1CQ15572 869 aaPredicted RBP16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 ERO1AQ96HE7 468 aa16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 R3HDMLQ9H3Y0 253 aa16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 ANTXR1Q9H6X2 564 aa16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
SIRPB3P-201ENST00000340424 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 PTPRAP18433 802 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 AAMPQ13685 434 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 ANKRD23Q86SG2 305 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 TGFBRAP1Q8WUH2 860 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 CDK5RAP2Q96SN8 1893 aa16.18■□□□□ 0.18
SIRPB3P-201ENST00000340424 BTBD19C9JJ37 291 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 GOLIM4O00461 696 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 SP3Q02447 781 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 SLC9C2Q5TAH2 1124 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 FASTKD5Q7L8L6 764 aaKnown RBP16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 FOXP4Q8IVH2 680 aaPredicted RBP16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 HAUS7Q99871 368 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 TRIM34Q9BYJ4 488 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 GINM1Q9NU53 330 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 PAG1Q9NWQ8 432 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 ZHX2Q9Y6X8 837 aa16.17■□□□□ 0.18
SIRPB3P-201ENST00000340424 A0A0G2JLL6 359 aaPredicted RBP16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 CCDC85CA6NKD9 419 aa16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 PDE6AP16499 860 aa16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 PRRT2Q7Z6L0 340 aaPredicted RBP16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 AFG3L2Q9Y4W6 797 aa16.16■□□□□ 0.18
SIRPB3P-201ENST00000340424 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 TLR2O60603 784 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 CAP2P40123 477 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 USP5P45974 858 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 ECHDC1Q9NTX5 307 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
SIRPB3P-201ENST00000340424 DYNLL1P63167 89 aaKnown RBP16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 ZSCAN25Q6NSZ9 544 aa16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 PARK7Q99497 189 aaKnown RBP16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 RIOK1Q9BRS2 568 aaKnown RBP16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 EHD4Q9H223 541 aa16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 BOLA2Q9H3K6 86 aa16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 AS3MTQ9HBK9 375 aa16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
SIRPB3P-201ENST00000340424 SIPA1L1O43166 1804 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 PHIPQ8WWQ0 1821 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 PDHXO00330 501 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 ASNSP08243 561 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 MOGSQ13724 837 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
SIRPB3P-201ENST00000340424 ATAD5Q96QE3 1844 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 MYH1P12882 1939 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 TCRBV5S4A2TA0A5A2 114 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 FAM196BA6NMK8 535 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 USP17L5A8MUK1 530 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 GNRH1P01148 92 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 KIF22Q14807 665 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 UBE3CQ15386 1083 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 OTOP1Q7RTM1 612 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 PROCA1Q8NCQ7 364 aaPredicted RBP16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 EFCC1Q9HA90 598 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 SERPINB13Q9UIV8 391 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
SIRPB3P-201ENST00000340424 PTPRFP10586 1907 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 HTTP42858 3142 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 ADD2P35612 726 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 GPAT2Q6NUI2 795 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 CRBNQ96SW2 442 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 SAP30BPQ9UHR5 308 aaKnown RBP16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 TTC41PQ6P2S7 1318 aa16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
SIRPB3P-201ENST00000340424 MYH7P12883 1935 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 LACTBP83111 547 aaPredicted RBP16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 PABPC4Q13310 644 aaKnown RBP eCLIP16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 C17orf99Q6UX52 265 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 WDR18Q9BV38 432 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 DNAJC18Q9H819 358 aa16.1■□□□□ 0.17
SIRPB3P-201ENST00000340424 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms