RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 RXRAP19793 462 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 APOBEC3HQ6NTF7 200 aaKnown RBP24.87■■□□□ 1.57
VRK2-201ENST00000340157 KIAA0825Q8IV33 1275 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 DYNLL2Q96FJ2 89 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 MYL10Q9BUA6 226 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 RANBP6O60518 1105 aaKnown RBP24.86■■□□□ 1.57
VRK2-201ENST00000340157 F13A1P00488 732 aa24.86■■□□□ 1.57
VRK2-201ENST00000340157 CDC37L1Q7L3B6 337 aa24.86■■□□□ 1.57
VRK2-201ENST00000340157 PCDHAC2Q9Y5I4 1007 aa24.86■■□□□ 1.57
VRK2-201ENST00000340157 TNKSO95271 1327 aa24.86■■□□□ 1.57
VRK2-201ENST00000340157 FDPSP14324 419 aaKnown RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 CRKP46108 304 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 WTAPQ15007 396 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 MCTP1Q6DN14 999 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 TEKT1Q969V4 418 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 FAM217BQ9NTX9 383 aaPredicted RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 NID2Q14112 1375 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 VPS37CA5D8V6 355 aaPredicted RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 WDHD1O75717 1129 aaPredicted RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 SLC3A2P08195 630 aaKnown RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 PDCP20941 246 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 CDC27P30260 824 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 SART3Q15020 963 aaKnown RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 NFXL1Q6ZNB6 911 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 MICU3Q86XE3 530 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 ENAHQ8N8S7 591 aaPredicted RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 UBAC1Q9BSL1 405 aa24.85■■□□□ 1.57
VRK2-201ENST00000340157 PPP1R1BQ9UD71 204 aaPredicted RBP24.85■■□□□ 1.57
VRK2-201ENST00000340157 ZBTB43O43298 467 aa24.84■■□□□ 1.57
VRK2-201ENST00000340157 METAP2P50579 478 aaKnown RBP eCLIP24.84■■□□□ 1.57
VRK2-201ENST00000340157 HMGN5P82970 282 aaKnown RBP24.84■■□□□ 1.57
VRK2-201ENST00000340157 PDE4BQ07343 736 aa24.84■■□□□ 1.57
VRK2-201ENST00000340157 DALRD3Q5D0E6 543 aaKnown RBP24.84■■□□□ 1.57
VRK2-201ENST00000340157 ZSCAN10Q96SZ4 725 aaPredicted RBP24.84■■□□□ 1.57
VRK2-201ENST00000340157 DDX4Q9NQI0 724 aaKnown RBP24.84■■□□□ 1.57
VRK2-201ENST00000340157 FAM47AQ5JRC9 791 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 CDC42EP5Q6NZY7 148 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 SLC44A5Q8NCS7 719 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 ZDHHC15Q96MV8 337 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 MRIQ9BWK5 157 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 CD2APQ9Y5K6 639 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 SLC12A7Q9Y666 1083 aa24.83■■□□□ 1.57
VRK2-201ENST00000340157 CCDC69A6NI79 296 aa24.83■■□□□ 1.56
VRK2-201ENST00000340157 POLR3DP05423 398 aaPredicted RBP24.83■■□□□ 1.56
VRK2-201ENST00000340157 ADD1P35611 737 aaKnown RBP24.83■■□□□ 1.56
VRK2-201ENST00000340157 FOXD4L6Q3SYB3 417 aaPredicted RBP24.83■■□□□ 1.56
VRK2-201ENST00000340157 SOGA3Q5TF21 947 aa24.83■■□□□ 1.56
VRK2-201ENST00000340157 FOXD4L3Q6VB84 417 aaPredicted RBP24.83■■□□□ 1.56
VRK2-201ENST00000340157 NMT2O60551 498 aa24.82■■□□□ 1.56
VRK2-201ENST00000340157 CCDC144CPQ8IYA2 1237 aa24.82■■□□□ 1.56
VRK2-201ENST00000340157 LARGE2Q8N3Y3 721 aa24.82■■□□□ 1.56
VRK2-201ENST00000340157 USP40Q9NVE5 1235 aa24.82■■□□□ 1.56
VRK2-201ENST00000340157 ERICH2A1L162 156 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 HDLBPQ00341 1268 aaKnown RBP24.81■■□□□ 1.56
VRK2-201ENST00000340157 CHMP4CQ96CF2 233 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 DHX16O60231 1041 aaKnown RBP24.81■■□□□ 1.56
VRK2-201ENST00000340157 PDIA4P13667 645 aaKnown RBP24.81■■□□□ 1.56
VRK2-201ENST00000340157 NTRK3Q16288 839 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 AMOTL1Q8IY63 956 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 TMTC2Q8N394 836 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 FAM184AQ8NB25 1140 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 LMBRD1Q9NUN5 540 aa24.81■■□□□ 1.56
VRK2-201ENST00000340157 GOLGA8AA7E2F4 631 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 TRAK2O60296 914 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 PICALMQ13492 652 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 IQCA1Q86XH1 822 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 ZNF654Q8IZM8 581 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 VPS33BQ9H267 617 aa24.8■■□□□ 1.56
VRK2-201ENST00000340157 MYH15Q9Y2K3 1946 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 C16orf86Q6ZW13 317 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 MYH8P13535 1937 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 SIPA1L1O43166 1804 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 GOLGA6L22H0YM25 854 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 CPLX1O14810 134 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 RAD17O75943 681 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 FERMT3Q86UX7 667 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 SERPINA10Q9UK55 444 aa24.79■■□□□ 1.56
VRK2-201ENST00000340157 TSPY2A6NKD2 308 aa24.78■■□□□ 1.56
VRK2-201ENST00000340157 NFKBIEO00221 500 aa24.78■■□□□ 1.56
VRK2-201ENST00000340157 RASA1P20936 1047 aa24.78■■□□□ 1.56
VRK2-201ENST00000340157 IARSP41252 1262 aaKnown RBP24.78■■□□□ 1.56
VRK2-201ENST00000340157 NFIAQ12857 509 aa24.78■■□□□ 1.56
VRK2-201ENST00000340157 PSMD14O00487 310 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 FOSBP53539 338 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 RCAN1P53805 252 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 TFAP4Q01664 338 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 IFIT1BQ5T764 474 aaKnown RBP24.77■■□□□ 1.56
VRK2-201ENST00000340157 RCSD1Q6JBY9 416 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 GMLQ99445 158 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 IL17RBQ9NRM6 502 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 ORC3Q9UBD5 711 aaPredicted RBP24.77■■□□□ 1.56
VRK2-201ENST00000340157 VIL1P09327 827 aaKnown RBP24.77■■□□□ 1.56
VRK2-201ENST00000340157 CDK8P49336 464 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 RSBN1LQ6PCB5 846 aaPredicted RBP24.77■■□□□ 1.56
VRK2-201ENST00000340157 MKNK2Q9HBH9 465 aa24.77■■□□□ 1.56
VRK2-201ENST00000340157 SYNE3Q6ZMZ3 975 aa24.76■■□□□ 1.55
VRK2-201ENST00000340157 NLGN2Q8NFZ4 835 aa24.76■■□□□ 1.55
VRK2-201ENST00000340157 OSBPL5Q9H0X9 879 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms