RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
CSRP1-201ENST00000340006 ANAPC15P60006 121 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 PRAMEF18Q5VWM3 479 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 FOXP4Q8IVH2 680 aaPredicted RBP17.48■□□□□ 0.39
CSRP1-201ENST00000340006 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 SERPINB13Q9UIV8 391 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 TAF6LQ9Y6J9 622 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 PSMA5P28066 241 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 KRT26Q7Z3Y9 468 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 KCNB2Q92953 911 aa17.48■□□□□ 0.39
CSRP1-201ENST00000340006 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
CSRP1-201ENST00000340006 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
CSRP1-201ENST00000340006 PITPNM2Q9BZ72 1349 aa17.47■□□□□ 0.39
CSRP1-201ENST00000340006 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
CSRP1-201ENST00000340006 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
CSRP1-201ENST00000340006 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
CSRP1-201ENST00000340006 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
CSRP1-201ENST00000340006 PRDM1O75626 825 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 TBC1D10CQ8IV04 446 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 NCOA7Q8NI08 942 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 NBPF3Q9H094 633 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 RANBP6O60518 1105 aaKnown RBP17.46■□□□□ 0.39
CSRP1-201ENST00000340006 POTEIP0CG38 1075 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 POTEJP0CG39 1038 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 CASTP20810 708 aaKnown RBP17.46■□□□□ 0.39
CSRP1-201ENST00000340006 CDK8P49336 464 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 STAG1Q8WVM7 1258 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 CNNM2Q9H8M5 875 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSRP1-201ENST00000340006 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
CSRP1-201ENST00000340006 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
CSRP1-201ENST00000340006 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
CSRP1-201ENST00000340006 KRT23Q9C075 422 aa17.45■□□□□ 0.38
CSRP1-201ENST00000340006 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
CSRP1-201ENST00000340006 ATRNL1Q5VV63 1379 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 FAM196BA6NMK8 535 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 SLURP2P0DP57 97 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-201ENST00000340006 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 CDAN1Q8IWY9 1227 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 SLC44A5Q8NCS7 719 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 SWAP70Q9UH65 585 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 LAMB1P07942 1786 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 B4E1Z4 1266 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
CSRP1-201ENST00000340006 PCP11498 1178 aaKnown RBP17.44■□□□□ 0.38
CSRP1-201ENST00000340006 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 ESR2Q92731 530 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 EHD4Q9H223 541 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
CSRP1-201ENST00000340006 KDM4AO75164 1064 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 YY1P25490 414 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 DLK2Q6UY11 383 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
CSRP1-201ENST00000340006 KIF2CQ99661 725 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
CSRP1-201ENST00000340006 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
CSRP1-201ENST00000340006 HERC5Q9UII4 1024 aaKnown RBP17.43■□□□□ 0.38
CSRP1-201ENST00000340006 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
CSRP1-201ENST00000340006 NEDD4P46934 1319 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 MYH8P13535 1937 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 TSPY2A6NKD2 308 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 CPA1P15085 419 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 NEK4P51957 841 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 FAM47AQ5JRC9 791 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 MCM5P33992 734 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 FGD1P98174 961 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 GABPAQ06546 454 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
CSRP1-201ENST00000340006 RUFY3Q7L099 469 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 TM6SF1Q9BZW5 370 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 ZSWIM5Q9P217 1185 aa17.42■□□□□ 0.38
CSRP1-201ENST00000340006 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
CSRP1-201ENST00000340006 DDX60LQ5H9U9 1706 aaKnown RBP17.41■□□□□ 0.38
CSRP1-201ENST00000340006 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
CSRP1-201ENST00000340006 FGRP09769 529 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 NF2P35240 595 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 TFAP4Q01664 338 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 PRKG1Q13976 671 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 RABEP1Q15276 862 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 DCAF15Q66K64 600 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 DHX32Q7L7V1 743 aaKnown RBP17.41■□□□□ 0.38
CSRP1-201ENST00000340006 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
CSRP1-201ENST00000340006 ORC4O43929 436 aa17.4■□□□□ 0.38
CSRP1-201ENST00000340006 TBC1D12O60347 775 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms