RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 BSDC1Q9NW68 430 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 SERTAD1Q9UHV2 236 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CA12O43570 354 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 HOXB7P09629 217 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 DLGAP5Q15398 846 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 MFSD14CQ5VZR4 134 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 REM2Q8IYK8 340 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TRIM6Q9C030 488 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 Q9H521 79 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 TRIM35Q9UPQ4 493 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ZNF157P51786 506 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 MCM6Q14566 821 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CWC27Q6UX04 472 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 NUP133Q8WUM0 1156 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 LRRC37A3O60309 1634 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 NOP56O00567 594 aaKnown RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ALDH1A1P00352 501 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CHRNA2Q15822 529 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC93Q567U6 631 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 SRGAP1Q7Z6B7 1085 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 MICALL1Q8N3F8 863 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 OTUD6BQ8N6M0 293 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 NACA2Q9H009 215 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 HACL1Q9UJ83 578 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 LTN1O94822 1766 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 A0A1B0GVL5 298 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ESPNB1AK53 854 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 KCNQ2O43526 872 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 VEGFAP15692 232 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-202ENST00000339701 RUNDC1Q96C34 613 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 DRC3Q9H069 523 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 ANAPC4Q9UJX5 808 aa3.7□□□□□ -1.82
CSMD3-202ENST00000339701 KIF5BP33176 963 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 CTCFP49711 727 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 NBPF9Q3BBW0 867 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 CCDC124Q96CT7 223 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 CEP63Q96MT8 703 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TSGA10Q9BZW7 698 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 FTOQ9C0B1 505 aaKnown RBP eCLIP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ZFYVE28Q9HCC9 887 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 DONSONQ9NYP3 566 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SCP2P22307 547 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SSTR3P32745 418 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TDO2P48775 406 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 NBPF10Q6P3W6 841 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SDCCAG8Q86SQ7 713 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 HVCN1Q96D96 273 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SELENOOQ9BVL4 669 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ABCF3Q9NUQ8 709 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ZWINTO95229 277 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 PAX3P23760 479 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ZNF131P52739 623 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 GABPB1Q06547 395 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 AAK1Q2M2I8 961 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TSNAXIP1Q2TAA8 658 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TSPY26PQ9H489 355 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ANLNQ9NQW6 1124 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 EDC4Q6P2E9 1401 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 EBAG9O00559 213 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MAP3K7O43318 606 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 RNF8O76064 485 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SKILP12757 684 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 CAPN2P17655 700 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 GNAQP50148 359 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MAP7D1Q3KQU3 841 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TEKT2Q9UIF3 430 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 BRPF3Q9ULD4 1205 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 GOLGA8TH3BQL2 631 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 FOXP2O15409 715 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 GOLGA8HP0CJ92 632 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 FOSBP53539 338 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ELMOD1Q8N336 334 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 RUNDC3BQ96NL0 473 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ZHX3Q9H4I2 956 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 KIF9Q9HAQ2 790 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 SAMM50Q9Y512 469 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ANKRD36CQ5JPF3 1778 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 DTNBO60941 627 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MRPS9P82933 396 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 NONOQ15233 471 aaKnown RBP eCLIP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MAIP1Q8WWC4 291 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 CLUAP1Q96AJ1 413 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MTFR1LQ9H019 292 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 NUP188Q5SRE5 1749 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 EIF5P55010 431 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 MAP3K12Q12852 859 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 GPR161Q8N6U8 529 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 NKX2-3Q8TAU0 364 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ANKRD24Q8TF21 1146 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 ZMAT2Q96NC0 199 aaKnown RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 EVA1BQ9NVM1 165 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 FAM8A1Q9UBU6 413 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 DYTNA2CJ06 578 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 UBTFL1P0CB47 393 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-202ENST00000339701 PDE4BQ07343 736 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 LGSNQ5TDP6 509 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 OLFML2BQ68BL8 750 aa3.69□□□□□ -1.82
CSMD3-202ENST00000339701 TRIM42Q8IWZ5 723 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms