RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
OTOF-203ENST00000339598 AATFQ9NY61 560 aaKnown RBP eCLIP13.97□□□□□ -0.17
OTOF-203ENST00000339598 ABCC4O15439 1325 aa13.97□□□□□ -0.17
OTOF-203ENST00000339598 PTPRTO14522 1441 aa13.97□□□□□ -0.17
OTOF-203ENST00000339598 PTH1RQ03431 593 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 BIRC3Q13489 604 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 TUBB2AQ13885 445 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 PSMB7Q99436 277 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 EYA3Q99504 573 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 TUBB2BQ9BVA1 445 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 SAMD15Q9P1V8 674 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 NDUFAB1O14561 156 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 TOM1O60784 492 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 TNFAIP3P21580 790 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 SLC9C1Q4G0N8 1177 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 SLF1Q9BQI6 1058 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 NONOQ15233 471 aaKnown RBP eCLIP13.96□□□□□ -0.17
OTOF-203ENST00000339598 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
OTOF-203ENST00000339598 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.18
OTOF-203ENST00000339598 UFL1O94874 794 aa13.96□□□□□ -0.18
OTOF-203ENST00000339598 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.18
OTOF-203ENST00000339598 TMEM87AQ8NBN3 555 aa13.96□□□□□ -0.18
OTOF-203ENST00000339598 TSC1Q92574 1164 aa13.96□□□□□ -0.18
OTOF-203ENST00000339598 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.18
OTOF-203ENST00000339598 A0A0D9SFI3 127 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 CHMP2AO43633 222 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 ADALQ6DHV7 355 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 DYMQ7RTS9 669 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 CNBD1Q8NA66 436 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 SNX29Q8TEQ0 813 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 VPS54Q9P1Q0 977 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 MTMR6Q9Y217 621 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 HAUS3Q68CZ6 603 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 CHAMP1Q96JM3 812 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 NUP58Q9BVL2 599 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 SECISBP2LQ93073 1101 aaKnown RBP13.95□□□□□ -0.18
OTOF-203ENST00000339598 IBTKQ9P2D0 1353 aaPredicted RBP13.95□□□□□ -0.18
OTOF-203ENST00000339598 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 HSPA2P54652 639 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
OTOF-203ENST00000339598 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 AFAP1L1Q8TED9 768 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
OTOF-203ENST00000339598 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
OTOF-203ENST00000339598 INSRP06213 1382 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 B4DLN1 442 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 NR1I2O75469 434 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 VIMP08670 466 aaKnown RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 SPATA5Q8NB90 893 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 FNBP1Q96RU3 617 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 NAP1L3Q99457 506 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 INF2Q27J81 1249 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 KCNQ3O43525 872 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 ARID4AP29374 1257 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 KRBA2Q6ZNG9 492 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 SMAP1Q8IYB5 467 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 MSANTD4Q8NCY6 345 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 ACTN4O43707 911 aaKnown RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 BLMP54132 1417 aaPredicted RBP13.94□□□□□ -0.18
OTOF-203ENST00000339598 LRMPQ12912 555 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 SETDB1Q15047 1291 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 SERTAD1Q9UHV2 236 aa13.94□□□□□ -0.18
OTOF-203ENST00000339598 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 KRT5P13647 590 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 KRT25Q7Z3Z0 450 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 CEP104O60308 925 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
OTOF-203ENST00000339598 TFAP4Q01664 338 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 PNOCQ13519 176 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 GAS2L3Q86XJ1 694 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
OTOF-203ENST00000339598 GOLGA6CA6NDK9 693 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 GOLGA6DP0CG33 693 aa13.93□□□□□ -0.18
OTOF-203ENST00000339598 PFKFB1P16118 471 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms