RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SHISA4Q96DD7 197 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ZSCAN10Q96SZ4 725 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 KCNJ14Q9UNX9 436 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ATP6V0A2Q9Y487 856 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 PDS5AQ29RF7 1337 aaKnown RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 A0A087WWV3 80 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 USP5P45974 858 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 CCDC183Q5T5S1 534 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 KRT40Q6A162 431 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 SP8Q8IXZ3 490 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 FANCBQ8NB91 859 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 PIBF1Q8WXW3 757 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ERCC4Q92889 916 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 PCDHAC2Q9Y5I4 1007 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ANKRD31Q8N7Z5 1873 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 KIF23Q02241 960 aaPredicted RBP8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 C15orf52Q6ZUT6 534 aaKnown RBP8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 CAMKK2Q96RR4 588 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 GOLPH3LQ9H4A5 285 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 ATP8A2Q9NTI2 1148 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 ELP1O95163 1332 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 ERICH2A1L162 156 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 GOLGA6L4A6NEF3 574 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 PLEKHA8P1O95397 391 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 FGRP09769 529 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 BTDP43251 543 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 SCNN1DP51172 638 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 RTN1Q16799 776 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 SPTY2D1Q68D10 685 aaPredicted RBP8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 RASGRP2Q7LDG7 609 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 NBPF11Q86T75 865 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 MPNDQ8N594 471 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 BICD2Q8TD16 824 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 DBNDD1Q9H9R9 158 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 RCOR1Q9UKL0 485 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
SRFBP1-201ENST00000339397 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 NPR1P16066 1061 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 SART3Q15020 963 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 IFIT1BQ5T764 474 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 C12orf60Q5U649 245 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 BTBD18B2RXH4 712 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 MARCKSP29966 332 aaPredicted RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 SSRP1Q08945 709 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 TROAPQ12815 778 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 MYSM1Q5VVJ2 828 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 RCSD1Q6JBY9 416 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 DPP8Q6V1X1 898 aaPredicted RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 SYNE3Q6ZMZ3 975 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 CRACR2BQ8N4Y2 399 aaPredicted RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 TSPY26PQ9H489 355 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 PCDHA7Q9UN72 937 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 KIF3AQ9Y496 699 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
SRFBP1-201ENST00000339397 ADAMTS3O15072 1205 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 IFNAR1P17181 557 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 ME1P48163 572 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 RHBDL3P58872 404 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 TFAP4Q01664 338 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 NR5A1Q13285 461 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 CSPP1Q1MSJ5 1256 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 SYAP1Q96A49 352 aaPredicted RBP8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 A0A1B0GVL5 298 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 TSPY2A6NKD2 308 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 FMNL1O95466 1100 aaPredicted RBP8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 PDE6BP35913 854 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 SNW1Q13573 536 aaKnown RBP8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 IQCA1Q86XH1 822 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 CCAR1Q8IX12 1150 aaKnown RBP8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 LINC00301Q8NCQ3 95 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 MASTLQ96GX5 879 aa8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
SRFBP1-201ENST00000339397 GPR75-ASB3A0A0A6YYF3 556 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 PPP4CP60510 307 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 FUT2Q10981 343 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 PICALMQ13492 652 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 PKN1Q16512 942 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 SBK1Q52WX2 424 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 TIAM2Q8IVF5 1701 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 DAGLAQ9Y4D2 1042 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
SRFBP1-201ENST00000339397 WDHD1O75717 1129 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms