RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TRIM34Q9BYJ4 488 aa23.79■■□□□ 1.4
ITGA4-202ENST00000339307 PLCG2P16885 1265 aa23.78■■□□□ 1.4
ITGA4-202ENST00000339307 MAPKAPK5Q8IW41 473 aa23.78■■□□□ 1.4
ITGA4-202ENST00000339307 BCL11AQ9H165 835 aa23.78■■□□□ 1.4
ITGA4-202ENST00000339307 TLR7Q9NYK1 1049 aaKnown RBP23.78■■□□□ 1.4
ITGA4-202ENST00000339307 NOP58Q9Y2X3 529 aaKnown RBP23.78■■□□□ 1.4
ITGA4-202ENST00000339307 CENPFP49454 3210 aa23.78■■□□□ 1.4
ITGA4-202ENST00000339307 KIAA0100Q14667 2235 aaKnown RBP23.77■■□□□ 1.4
ITGA4-202ENST00000339307 BCRP11274 1271 aa23.77■■□□□ 1.4
ITGA4-202ENST00000339307 SPP2Q13103 211 aa23.77■■□□□ 1.4
ITGA4-202ENST00000339307 DBNLQ9UJU6 430 aaKnown RBP23.77■■□□□ 1.4
ITGA4-202ENST00000339307 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
ITGA4-202ENST00000339307 GRK4P32298 578 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 PIH1D3Q9NQM4 214 aaKnown RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 PI4KBQ9UBF8 816 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 EXOC6BQ9Y2D4 811 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 RBBP6Q7Z6E9 1792 aaKnown RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 IDH1O75874 414 aaKnown RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 CYP7A1P22680 504 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 CAP2P40123 477 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 PRKCZQ05513 592 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 CEP85Q6P2H3 762 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 ADGRA1Q86SQ6 560 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 CRACR2BQ8N4Y2 399 aaPredicted RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 ZNF280CQ8ND82 737 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 EAF2Q96CJ1 260 aaPredicted RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 DHX36Q9H2U1 1008 aaKnown RBP23.76■■□□□ 1.39
ITGA4-202ENST00000339307 AGTPBP1Q9UPW5 1226 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
ITGA4-202ENST00000339307 MTFR1Q15390 333 aa23.75■■□□□ 1.39
ITGA4-202ENST00000339307 TREML2Q5T2D2 321 aa23.75■■□□□ 1.39
ITGA4-202ENST00000339307 ZNF512BQ96KM6 892 aaPredicted RBP23.75■■□□□ 1.39
ITGA4-202ENST00000339307 SAP30BPQ9UHR5 308 aaKnown RBP23.75■■□□□ 1.39
ITGA4-202ENST00000339307 HERC5Q9UII4 1024 aaKnown RBP23.75■■□□□ 1.39
ITGA4-202ENST00000339307 USP17L5A8MUK1 530 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 HMGCS2P54868 508 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 AACSQ86V21 672 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 ANKRD13CQ8N6S4 541 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 AS3MTQ9HBK9 375 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 PNMA3Q9UL41 463 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 TAOK2Q9UL54 1235 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 PALD1Q9ULE6 856 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 NDUFB9Q9Y6M9 179 aa23.74■■□□□ 1.39
ITGA4-202ENST00000339307 APBB1O00213 710 aa23.73■■□□□ 1.39
ITGA4-202ENST00000339307 TNPO2O14787 897 aaKnown RBP23.73■■□□□ 1.39
ITGA4-202ENST00000339307 COL2A1P02458 1487 aaPredicted RBP23.73■■□□□ 1.39
ITGA4-202ENST00000339307 FLT1P17948 1338 aa23.73■■□□□ 1.39
ITGA4-202ENST00000339307 PPP4CP60510 307 aa23.73■■□□□ 1.39
ITGA4-202ENST00000339307 DYNLL1P63167 89 aaKnown RBP23.73■■□□□ 1.39
ITGA4-202ENST00000339307 RRP1BQ14684 758 aaKnown RBP23.73■■□□□ 1.39
ITGA4-202ENST00000339307 ERC1Q8IUD2 1116 aa23.73■■□□□ 1.39
ITGA4-202ENST00000339307 GABRQQ9UN88 632 aa23.73■■□□□ 1.39
ITGA4-202ENST00000339307 PHIPQ8WWQ0 1821 aa23.72■■□□□ 1.39
ITGA4-202ENST00000339307 UBXN2AP68543 259 aa23.72■■□□□ 1.39
ITGA4-202ENST00000339307 MIGA1Q8NAN2 632 aa23.72■■□□□ 1.39
ITGA4-202ENST00000339307 MAST2Q6P0Q8 1798 aa23.72■■□□□ 1.39
ITGA4-202ENST00000339307 HLA-DOAP06340 250 aa23.71■■□□□ 1.39
ITGA4-202ENST00000339307 MS4A1P11836 297 aa23.71■■□□□ 1.39
ITGA4-202ENST00000339307 MAGEB6Q8N7X4 407 aa23.71■■□□□ 1.39
ITGA4-202ENST00000339307 PROCA1Q8NCQ7 364 aaPredicted RBP23.71■■□□□ 1.39
ITGA4-202ENST00000339307 TBC1D2Q9BYX2 928 aa23.71■■□□□ 1.39
ITGA4-202ENST00000339307 IL1RAPL2Q9NP60 686 aa23.71■■□□□ 1.39
ITGA4-202ENST00000339307 PTPRFP10586 1907 aa23.7■■□□□ 1.39
ITGA4-202ENST00000339307 USP5P45974 858 aa23.7■■□□□ 1.38
ITGA4-202ENST00000339307 PABPC4Q13310 644 aaKnown RBP eCLIP23.7■■□□□ 1.38
ITGA4-202ENST00000339307 FOXP4Q8IVH2 680 aaPredicted RBP23.7■■□□□ 1.38
ITGA4-202ENST00000339307 GCC1Q96CN9 775 aa23.7■■□□□ 1.38
ITGA4-202ENST00000339307 RNF208Q9H0X6 261 aa23.7■■□□□ 1.38
ITGA4-202ENST00000339307 MYO5AQ9Y4I1 1855 aaKnown RBP23.7■■□□□ 1.38
ITGA4-202ENST00000339307 CCL5P13501 91 aa23.69■■□□□ 1.38
ITGA4-202ENST00000339307 FLT3LGP49771 235 aa23.69■■□□□ 1.38
ITGA4-202ENST00000339307 HSP90AB4PQ58FF6 505 aa23.69■■□□□ 1.38
ITGA4-202ENST00000339307 ATAD5Q96QE3 1844 aa23.69■■□□□ 1.38
ITGA4-202ENST00000339307 MGAMO43451 1857 aa23.69■■□□□ 1.38
ITGA4-202ENST00000339307 ADCY3O60266 1144 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 GDF11O95390 407 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 ASNSP08243 561 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 MAP3K12Q12852 859 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 MTMR2Q13614 643 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 SLAIN1Q8ND83 568 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 COA7Q96BR5 231 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 ANTXR1Q9H6X2 564 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 TMOD4Q9NZQ9 345 aa23.68■■□□□ 1.38
ITGA4-202ENST00000339307 NKX2-3Q8TAU0 364 aa23.67■■□□□ 1.38
ITGA4-202ENST00000339307 COG6Q9Y2V7 657 aa23.67■■□□□ 1.38
ITGA4-202ENST00000339307 IGSF3O75054 1194 aa23.67■■□□□ 1.38
ITGA4-202ENST00000339307 ELNP15502 786 aa23.67■■□□□ 1.38
ITGA4-202ENST00000339307 RHPN1Q8TCX5 695 aa23.67■■□□□ 1.38
ITGA4-202ENST00000339307 BRCA2P51587 3418 aa23.66■■□□□ 1.38
ITGA4-202ENST00000339307 IRX3P78415 501 aaPredicted RBP23.66■■□□□ 1.38
ITGA4-202ENST00000339307 ASCC2Q9H1I8 757 aaPredicted RBP23.66■■□□□ 1.38
ITGA4-202ENST00000339307 DNAJC18Q9H819 358 aa23.66■■□□□ 1.38
ITGA4-202ENST00000339307 GCLCP48506 637 aaPredicted RBP23.65■■□□□ 1.38
ITGA4-202ENST00000339307 BACE1P56817 501 aa23.65■■□□□ 1.38
ITGA4-202ENST00000339307 JAG1P78504 1218 aa23.65■■□□□ 1.38
ITGA4-202ENST00000339307 FAM110CQ1W6H9 321 aa23.65■■□□□ 1.38
ITGA4-202ENST00000339307 SHROOM1Q2M3G4 852 aaPredicted RBP23.65■■□□□ 1.38
ITGA4-202ENST00000339307 CLASRPQ8N2M8 674 aaKnown RBP23.65■■□□□ 1.38
ITGA4-202ENST00000339307 MKI67P46013 3256 aaKnown RBP23.64■■□□□ 1.38
ITGA4-202ENST00000339307 HMMRO75330 724 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms