RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
SHANK2-201ENST00000338508 GNAT2P19087 354 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 CASP2P42575 452 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 CAPN12Q6ZSI9 719 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 CACNA2D3Q8IZS8 1091 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 UBL4BQ8N7F7 174 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 DAPK1P53355 1430 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 ARMT1Q9H993 441 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 ABCF3Q9NUQ8 709 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 AKR1B15C9JRZ8 316 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 RBBP5Q15291 538 aaKnown RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 MRPL44Q9H9J2 332 aaKnown RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 CFBP00751 764 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 SRGAP1Q7Z6B7 1085 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 GABPB2Q8TAK5 448 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 SCYL1Q96KG9 808 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 STK38LQ9Y2H1 464 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 KRT15P19012 456 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 GBP1P32455 592 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 KRBA2Q6ZNG9 492 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 IQUBQ8NA54 791 aa13.1□□□□□ -0.31
SHANK2-201ENST00000338508 BAG1Q99933 345 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
SHANK2-201ENST00000338508 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 TNNI1P19237 187 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
SHANK2-201ENST00000338508 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 MAGED2Q9UNF1 606 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-201ENST00000338508 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 I3L4J1 428 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 AK2P54819 239 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 MMS19Q96T76 1030 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
SHANK2-201ENST00000338508 SLC4A1P02730 911 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 CPA1P15085 419 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 PPP2R3AQ06190 1150 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
SHANK2-201ENST00000338508 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 KIF9Q9HAQ2 790 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 POLKQ9UBT6 870 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.09□□□□□ -0.31
SHANK2-201ENST00000338508 DNM2P50570 870 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 CREB3L3Q68CJ9 461 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 TTC21BQ7Z4L5 1316 aa13.09□□□□□ -0.31
SHANK2-201ENST00000338508 SMIM24O75264 130 aa13.08□□□□□ -0.31
SHANK2-201ENST00000338508 CD109Q6YHK3 1445 aa13.08□□□□□ -0.31
SHANK2-201ENST00000338508 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 GSTA1P08263 222 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 GSTA2P09210 222 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 KRT81Q14533 505 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 RAB3IPQ96QF0 476 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-201ENST00000338508 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
SHANK2-201ENST00000338508 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
SHANK2-201ENST00000338508 PDE1AP54750 535 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 SWAP70Q9UH65 585 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 CAPN9O14815 690 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
SHANK2-201ENST00000338508 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 PRDM1O75626 825 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 CAVIN2O95810 425 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 GPR162Q16538 588 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 ABCC11Q96J66 1382 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 KCNA4P22459 653 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 VPS37BQ9H9H4 285 aa13.08□□□□□ -0.32
SHANK2-201ENST00000338508 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 IRX3P78415 501 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 CCDC105Q8IYK2 499 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 RNF217Q8TC41 542 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 GLG1Q92896 1179 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 WDR7Q9Y4E6 1490 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 HDXQ7Z353 690 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 VSIG1Q86XK7 387 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 IGSF22Q8N9C0 903 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 MRPL46Q9H2W6 279 aaKnown RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
SHANK2-201ENST00000338508 STK25O00506 426 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 CEP104O60308 925 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 ZBED4O75132 1171 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 ANKRD42Q8N9B4 389 aa13.07□□□□□ -0.32
SHANK2-201ENST00000338508 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms