RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RTN1Q16799 776 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 LINS1Q8NG48 757 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 RIN2Q8WYP3 895 aaPredicted RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 SYNMO15061 1565 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 ARID4AP29374 1257 aaPredicted RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 VSTM4Q8IW00 320 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 BLZF1Q9H2G9 400 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 SAMSN1Q9NSI8 373 aaKnown RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 CEP83Q9Y592 693 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 FBF1Q8TES7 1133 aa14.87□□□□□ -0.03
COL2A1-201ENST00000337299 OSBPL5Q9H0X9 879 aaPredicted RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 TLR7Q9NYK1 1049 aaKnown RBP14.87□□□□□ -0.03
COL2A1-201ENST00000337299 GCOM1H8Y6P7 765 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 MYZAPP0CAP1 466 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 CMA1P23946 247 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 ZNF174Q15697 407 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 PTPROQ16827 1216 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SLC4A8Q2Y0W8 1093 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 TEX2Q8IWB9 1127 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 DHX40Q8IX18 779 aaKnown RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SUFUQ9UMX1 484 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 ARHGEF5Q12774 1597 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 E7EWF7 191 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 LGR6Q9HBX8 967 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SAMD15Q9P1V8 674 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 CCDC194A0A1B0GVG4 234 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 B4E1Z4 1266 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 MPHOSPH10O00566 681 aaKnown RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 CUTAO60888 179 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SSR1P43307 286 aaKnown RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 RBL2Q08999 1139 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 MTF1Q14872 753 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 TRIM68Q6AZZ1 485 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SMYD4Q8IYR2 804 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL2A1-201ENST00000337299 STK38LQ9Y2H1 464 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 CYP21A2P08686 494 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 SNCBQ16143 134 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 TCERG1LQ5VWI1 586 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 FCHSD1Q86WN1 690 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 CCDC170Q8IYT3 715 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 DPF2Q92785 391 aa14.86□□□□□ -0.03
COL2A1-201ENST00000337299 PFKFB2O60825 505 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 H2AFXP16104 143 aaPredicted RBP14.85□□□□□ -0.03
COL2A1-201ENST00000337299 WTAPQ15007 396 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 MUM1L1Q5H9M0 696 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 TCP11Q8WWU5 503 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 UBA5Q9GZZ9 404 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 VSNL1P62760 191 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 MFSD6Q6ZSS7 791 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 ANKRD13DQ6ZTN6 518 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 RNF113AO15541 343 aaKnown RBP14.85□□□□□ -0.03
COL2A1-201ENST00000337299 NECTIN1Q15223 517 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 SLC9C2Q5TAH2 1124 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 LINC00301Q8NCQ3 95 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
COL2A1-201ENST00000337299 hCG_1642624A0A1W2PR95 340 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 BIRC2Q13490 618 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 FLT4P35916 1363 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 TAF5LO75529 589 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 CHD1O14646 1710 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 SRGAP2O75044 1071 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 MCM7P33993 719 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 CCDC25Q86WR0 208 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 IFT20Q8IY31 132 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 FUCA2Q9BTY2 467 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
COL2A1-201ENST00000337299 RMND1Q9NWS8 449 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 ZNF446Q9NWS9 450 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 RTEL1Q9NZ71 1219 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 AKAP2Q9Y2D5 859 aa14.84□□□□□ -0.03
COL2A1-201ENST00000337299 EPN1Q9Y6I3 576 aaPredicted RBP14.84□□□□□ -0.03
COL2A1-201ENST00000337299 STARD3NLO95772 234 aa14.83□□□□□ -0.03
COL2A1-201ENST00000337299 ASIC1P78348 528 aa14.83□□□□□ -0.03
COL2A1-201ENST00000337299 SLC7A5Q01650 507 aa14.83□□□□□ -0.03
COL2A1-201ENST00000337299 EP400NLQ6ZTU2 488 aa14.83□□□□□ -0.03
COL2A1-201ENST00000337299 EIF4E1BA6NMX2 242 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 ZNF853P0CG23 659 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 CXCR5P32302 372 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 GGCXP38435 758 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 C2orf54Q08AI8 447 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 SOGA3Q5TF21 947 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 EXOC1Q9NV70 894 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 ZFYVE9O95405 1425 aa14.83□□□□□ -0.04
COL2A1-201ENST00000337299 PDIA3P30101 505 aaKnown RBP14.83□□□□□ -0.04
COL2A1-201ENST00000337299 KRT71Q3SY84 523 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms