RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ATP7BP35670 1465 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 HAUS7Q99871 368 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 MYH11P35749 1972 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 ARHGEF37A1IGU5 675 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 CCT6AP40227 531 aaKnown RBP13.69□□□□□ -0.22
FN1-202ENST00000336916 STIM2Q9P246 746 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
FN1-202ENST00000336916 EYA2O00167 538 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 ITGA6P23229 1130 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 CALCRLQ16602 461 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 SLFN12Q8IYM2 578 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 FAM81BQ96LP2 452 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 TIGD1Q96MW7 591 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 CRCPO75575 148 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
FN1-202ENST00000336916 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
FN1-202ENST00000336916 GJA3Q9Y6H8 435 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 CCDC6Q16204 474 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 TMED8Q6PL24 325 aaPredicted RBP13.68□□□□□ -0.22
FN1-202ENST00000336916 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
FN1-202ENST00000336916 NOL3O60936 208 aaKnown RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 CETN3O15182 167 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 DAPK3O43293 454 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 KRT5P13647 590 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 BIRC3Q13489 604 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 RIOK1Q9BRS2 568 aaKnown RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 N4BP1O75113 896 aaKnown RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 DHX58Q96C10 678 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 FLOT1O75955 427 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 CUL4BQ13620 913 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 TRMT1LQ7Z2T5 733 aaKnown RBP13.67□□□□□ -0.22
FN1-202ENST00000336916 FAM204AQ9H8W3 233 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
FN1-202ENST00000336916 SLC39A6Q13433 755 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 SETDB1Q15047 1291 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
FN1-202ENST00000336916 ELMSAN1Q6PJG2 1045 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 TMOD1P28289 359 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 PSMC4P43686 418 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 GRM1Q13255 1194 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 SKILP12757 684 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 ATF7P17544 494 aaPredicted RBP13.66□□□□□ -0.22
FN1-202ENST00000336916 SSH2Q76I76 1423 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 IQGAP3Q86VI3 1631 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 NLRP1Q9C000 1473 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 A0A1B0GUL7 405 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 CNKSR1Q969H4 720 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
FN1-202ENST00000336916 CUTAO60888 179 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 ITIH3Q06033 890 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
FN1-202ENST00000336916 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
FN1-202ENST00000336916 ZMYND15Q9H091 742 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 TYRO3Q06418 890 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 PLCB1Q9NQ66 1216 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 USP21Q9UK80 565 aa13.66□□□□□ -0.22
FN1-202ENST00000336916 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 PPP1R2P3Q6NXS1 205 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 ADCY7P51828 1080 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 TFCP2Q12800 502 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 MYOM2P54296 1465 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 WDR17Q8IZU2 1322 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 TRAF5O00463 557 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 CYP26C1Q6V0L0 522 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 NKIRAS1Q9NYS0 192 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 DLGAP5Q15398 846 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 RNF34Q969K3 372 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 MARCKSP29966 332 aaPredicted RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
FN1-202ENST00000336916 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 BIRC2Q13490 618 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 VPS52Q8N1B4 723 aa13.65□□□□□ -0.22
FN1-202ENST00000336916 MYL5Q02045 173 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 MYH6P13533 1939 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 SH2D4BQ5SQS7 431 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 BCAP29Q9UHQ4 241 aa13.64□□□□□ -0.23
FN1-202ENST00000336916 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
FN1-202ENST00000336916 MAGEF1Q9HAY2 307 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms