RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CDCA5Q96FF9 252 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 EHD4Q9H223 541 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 DNAJC18Q9H819 358 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 CTNNA3Q9UI47 895 aa20.85■□□□□ 0.93
CHGA-202ENST00000334654 HAND2P61296 217 aa20.84■□□□□ 0.93
CHGA-202ENST00000334654 CTDSPL2Q05D32 466 aa20.84■□□□□ 0.93
CHGA-202ENST00000334654 DYNLL2Q96FJ2 89 aa20.84■□□□□ 0.93
CHGA-202ENST00000334654 ROBO3Q96MS0 1386 aa20.84■□□□□ 0.93
CHGA-202ENST00000334654 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
CHGA-202ENST00000334654 KCNB2Q92953 911 aa20.83■□□□□ 0.93
CHGA-202ENST00000334654 FAM196BA6NMK8 535 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 SLC27A2O14975 620 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 TBC1D12O60347 775 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 TOMM70O94826 608 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 HLA-DOAP06340 250 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 HSPA4P34932 840 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 CREB3L3Q68CJ9 461 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 TBC1D10CQ8IV04 446 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 RBM46Q8TBY0 533 aaKnown RBP20.82■□□□□ 0.92
CHGA-202ENST00000334654 INCENPQ9NQS7 918 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 SERPINB13Q9UIV8 391 aa20.82■□□□□ 0.92
CHGA-202ENST00000334654 ZNF213O14771 459 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 FGRP09769 529 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
CHGA-202ENST00000334654 C16orf86Q6ZW13 317 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 MIGA2Q7L4E1 593 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 RASEFQ8IZ41 740 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 SLC44A5Q8NCS7 719 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHGA-202ENST00000334654 TRPM7Q96QT4 1865 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 EIF5BO60841 1220 aaKnown RBP20.81■□□□□ 0.92
CHGA-202ENST00000334654 SUPT20HL1Q3ZLR7 823 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 NKX2-3Q8TAU0 364 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 FZD1Q9UP38 647 aa20.81■□□□□ 0.92
CHGA-202ENST00000334654 SHMT1P34896 483 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 CDK8P49336 464 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 RRP1BQ14684 758 aaKnown RBP20.8■□□□□ 0.92
CHGA-202ENST00000334654 TSGA10IPQ3SY00 556 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 TATDN1Q6P1N9 297 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 STK11IPQ8N1F8 1099 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 SMC1BQ8NDV3 1235 aa20.8■□□□□ 0.92
CHGA-202ENST00000334654 HERC5Q9UII4 1024 aaKnown RBP20.8■□□□□ 0.92
CHGA-202ENST00000334654 PASKQ96RG2 1323 aa20.79■□□□□ 0.92
CHGA-202ENST00000334654 MYH8P13535 1937 aa20.79■□□□□ 0.92
CHGA-202ENST00000334654 PHF20L1A8MW92 1017 aa20.79■□□□□ 0.92
CHGA-202ENST00000334654 USP2O75604 605 aaPredicted RBP20.79■□□□□ 0.92
CHGA-202ENST00000334654 AKNAD1Q5T1N1 836 aa20.79■□□□□ 0.92
CHGA-202ENST00000334654 STAG1Q8WVM7 1258 aa20.79■□□□□ 0.92
CHGA-202ENST00000334654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.79■□□□□ 0.92
CHGA-202ENST00000334654 PAPPA2Q9BXP8 1791 aa20.78■□□□□ 0.92
CHGA-202ENST00000334654 CST9Q5W186 159 aa20.78■□□□□ 0.92
CHGA-202ENST00000334654 ZNF112Q9UJU3 913 aa20.78■□□□□ 0.92
CHGA-202ENST00000334654 TAOK2Q9UL54 1235 aa20.78■□□□□ 0.92
CHGA-202ENST00000334654 E7EWF7 191 aa20.77■□□□□ 0.92
CHGA-202ENST00000334654 RASA1P20936 1047 aa20.77■□□□□ 0.92
CHGA-202ENST00000334654 COL9A3Q14050 684 aaPredicted RBP20.77■□□□□ 0.92
CHGA-202ENST00000334654 CRACR2BQ8N4Y2 399 aaPredicted RBP20.77■□□□□ 0.92
CHGA-202ENST00000334654 HOOK2Q96ED9 719 aa20.77■□□□□ 0.92
CHGA-202ENST00000334654 SWAP70Q9UH65 585 aa20.77■□□□□ 0.92
CHGA-202ENST00000334654 SNX14Q9Y5W7 946 aa20.77■□□□□ 0.92
CHGA-202ENST00000334654 ORC4O43929 436 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 PRDM1O75626 825 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 JAG1P78504 1218 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 DCAF15Q66K64 600 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 KLRG1Q96E93 195 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 NEDD4P46934 1319 aa20.76■□□□□ 0.91
CHGA-202ENST00000334654 PRKG1Q13976 671 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 MAP3K11Q16584 847 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 ADCK5Q3MIX3 580 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 RNF20Q5VTR2 975 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 MFSD6Q6ZSS7 791 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 MOB2Q70IA6 237 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 IL17RAQ96F46 866 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 ZNF341Q9BYN7 854 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 OTOFQ9HC10 1997 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 SLC3A2P08195 630 aaKnown RBP20.75■□□□□ 0.91
CHGA-202ENST00000334654 PDE4BQ07343 736 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 FSTL1Q12841 308 aa20.75■□□□□ 0.91
CHGA-202ENST00000334654 SHROOM1Q2M3G4 852 aaPredicted RBP20.75■□□□□ 0.91
CHGA-202ENST00000334654 CELF2O95319 508 aaKnown RBP20.74■□□□□ 0.91
CHGA-202ENST00000334654 PCP11498 1178 aaKnown RBP20.74■□□□□ 0.91
CHGA-202ENST00000334654 INPP5BP32019 993 aa20.74■□□□□ 0.91
CHGA-202ENST00000334654 NF2P35240 595 aa20.74■□□□□ 0.91
CHGA-202ENST00000334654 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
CHGA-202ENST00000334654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHGA-202ENST00000334654 C22orf23Q9BZE7 217 aa20.74■□□□□ 0.91
CHGA-202ENST00000334654 RNF41Q9H4P4 317 aaPredicted RBP20.74■□□□□ 0.91
CHGA-202ENST00000334654 ZNF408Q9H9D4 720 aa20.74■□□□□ 0.91
CHGA-202ENST00000334654 GREB1LQ9C091 1923 aaPredicted RBP20.74■□□□□ 0.91
CHGA-202ENST00000334654 PPP1R12BO60237 982 aaPredicted RBP20.73■□□□□ 0.91
CHGA-202ENST00000334654 ZKSCAN1P17029 563 aaPredicted RBP20.73■□□□□ 0.91
CHGA-202ENST00000334654 TRIM34Q9BYJ4 488 aa20.73■□□□□ 0.91
CHGA-202ENST00000334654 MKNK2Q9HBH9 465 aa20.73■□□□□ 0.91
CHGA-202ENST00000334654 ATAD5Q96QE3 1844 aa20.73■□□□□ 0.91
CHGA-202ENST00000334654 AKR1B1P15121 316 aa20.72■□□□□ 0.91
CHGA-202ENST00000334654 MCCP23508 829 aa20.72■□□□□ 0.91
CHGA-202ENST00000334654 CAP2P40123 477 aa20.72■□□□□ 0.91
CHGA-202ENST00000334654 CERKLQ49MI3 558 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms