RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ADKP55263 362 aaKnown RBP10.9□□□□□ -0.66
COL4A6-201ENST00000334504 CFAP61Q8NHU2 1237 aa10.9□□□□□ -0.66
COL4A6-201ENST00000334504 SEC31AO94979 1220 aaKnown RBP10.9□□□□□ -0.67
COL4A6-201ENST00000334504 ANO1Q5XXA6 986 aa10.9□□□□□ -0.67
COL4A6-201ENST00000334504 LCA5Q86VQ0 697 aa10.9□□□□□ -0.67
COL4A6-201ENST00000334504 CSGALNACT2Q8N6G5 542 aa10.9□□□□□ -0.67
COL4A6-201ENST00000334504 PAG1Q9NWQ8 432 aa10.9□□□□□ -0.67
COL4A6-201ENST00000334504 E2F4Q16254 413 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC13Q8IYE1 715 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 N4BP2L2Q92802 583 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-201ENST00000334504 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-201ENST00000334504 ZKSCAN3Q9BRR0 538 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 POLE2P56282 527 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 RRP36Q96EU6 259 aaKnown RBP10.89□□□□□ -0.67
COL4A6-201ENST00000334504 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 ANXA1P04083 346 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 VPS41P49754 854 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 CAMSAP2Q08AD1 1489 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 XPO4Q9C0E2 1151 aaKnown RBP10.89□□□□□ -0.67
COL4A6-201ENST00000334504 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 POLR2DO15514 142 aaKnown RBP10.89□□□□□ -0.67
COL4A6-201ENST00000334504 PPP1R2P41236 205 aa10.89□□□□□ -0.67
COL4A6-201ENST00000334504 IFT88Q13099 833 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 PPP2R5CQ13362 524 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 LONRF2Q1L5Z9 754 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 LGSNQ5TDP6 509 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 RAB17Q9H0T7 212 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
COL4A6-201ENST00000334504 MED4Q9NPJ6 270 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 PPP2R5DQ14738 602 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 SLC9C2Q5TAH2 1124 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 RPGRIP1Q96KN7 1286 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 TMEM63CQ9P1W3 806 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 DAPK1P53355 1430 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 RNF113AO15541 343 aaKnown RBP10.88□□□□□ -0.67
COL4A6-201ENST00000334504 SERPINB6P35237 376 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 RILPL1Q5EBL4 403 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 LIN9Q5TKA1 542 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 NAA16Q6N069 864 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-201ENST00000334504 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 PEX26Q7Z412 305 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 SYCE1Q8N0S2 351 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 MLKLQ8NB16 471 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 PARP2Q9UGN5 583 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 JRKLQ9Y4A0 524 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 MRC2Q9UBG0 1479 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 C8orf37Q96NL8 207 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
COL4A6-201ENST00000334504 TTC41PQ6P2S7 1318 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 GSTO1P78417 241 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 HSP90AA5PQ58FG0 334 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 KSR1Q8IVT5 923 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 USTQ9Y2C2 406 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 NFE2L3Q9Y4A8 694 aa10.88□□□□□ -0.67
COL4A6-201ENST00000334504 ZNF202O95125 648 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 LRMPQ12912 555 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 DESI2Q9BSY9 194 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-201ENST00000334504 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 RAD51AP2Q09MP3 1159 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 HOMER3Q9NSC5 361 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 MAN1A1P33908 653 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 PLCD1P51178 756 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 WDR44Q5JSH3 913 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
COL4A6-201ENST00000334504 PPP2R2CQ9Y2T4 447 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 CEP85Q6P2H3 762 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 TRMT44Q8IYL2 757 aaKnown RBP10.87□□□□□ -0.67
COL4A6-201ENST00000334504 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 MRFAP1Q9Y605 127 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
COL4A6-201ENST00000334504 NUCKS1Q9H1E3 243 aaKnown RBP10.87□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
COL4A6-201ENST00000334504 PDZD8Q8NEN9 1154 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 CALUO43852 315 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-201ENST00000334504 CUTAO60888 179 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 INPP1P49441 399 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 NBPF6Q5VWK0 638 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 NBPF4Q96M43 638 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 CHPF2Q9P2E5 772 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 IQSEC3Q9UPP2 1182 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-201ENST00000334504 A0A087WUV0 522 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-201ENST00000334504 MAGEB6P1A0A0J9YX57 407 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 STX10O60499 249 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 PHEXP78562 749 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 CCDC93Q567U6 631 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 SFMBT2Q5VUG0 894 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 KCTD16Q68DU8 428 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 GIPC1O14908 333 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 KLHL30Q0D2K2 578 aa10.86□□□□□ -0.67
COL4A6-201ENST00000334504 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms