RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 USP27XA6NNY8 438 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 TOB1P50616 345 aaPredicted RBP21.85■■□□□ 1.09
RFTN1-201ENST00000334133 NOSTRINQ8IVI9 506 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 NGLY1Q96IV0 654 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 IFNKQ9P0W0 207 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 FAM205CA6NFA0 338 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 RIOK3O14730 519 aaKnown RBP21.85■■□□□ 1.09
RFTN1-201ENST00000334133 MRFAP1L1Q96HT8 127 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 RIOK1Q9BRS2 568 aaKnown RBP21.85■■□□□ 1.09
RFTN1-201ENST00000334133 DOCK2Q92608 1830 aa21.85■■□□□ 1.09
RFTN1-201ENST00000334133 BSDC1Q9NW68 430 aaPredicted RBP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 TRMT1Q9NXH9 659 aaKnown RBP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 NMT2O60551 498 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 MMP1P03956 469 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 ATP1A3P13637 1013 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 NBPF11Q86T75 865 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 CRACR2BQ8N4Y2 399 aaPredicted RBP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 PDILTQ8N807 584 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 ZNF592Q92610 1267 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 XPO4Q9C0E2 1151 aaKnown RBP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 AATFQ9NY61 560 aaKnown RBP eCLIP21.84■■□□□ 1.09
RFTN1-201ENST00000334133 EP400Q96L91 3159 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 GNPATO15228 680 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 TXNRD3Q86VQ6 643 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 VPS54Q9P1Q0 977 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 PCDHB6Q9Y5E3 794 aa21.84■■□□□ 1.09
RFTN1-201ENST00000334133 BCL9LQ86UU0 1499 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 BAZ2AQ9UIF9 1905 aaKnown RBP21.83■■□□□ 1.09
RFTN1-201ENST00000334133 ZNF804BA4D1E1 1349 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 NPHP1O15259 732 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 NLRP12P59046 1061 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 TPD52L1Q16890 204 aaPredicted RBP21.83■■□□□ 1.09
RFTN1-201ENST00000334133 NBPF5PQ86XG9 351 aaPredicted RBP21.83■■□□□ 1.09
RFTN1-201ENST00000334133 PRIMPOLQ96LW4 560 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 ECM29Q5VYK3 1845 aa21.83■■□□□ 1.09
RFTN1-201ENST00000334133 USP17L12C9JPN9 530 aa21.83■■□□□ 1.08
RFTN1-201ENST00000334133 USP17L21D6R901 530 aa21.83■■□□□ 1.08
RFTN1-201ENST00000334133 SKILP12757 684 aa21.83■■□□□ 1.08
RFTN1-201ENST00000334133 SAFBQ15424 915 aaKnown RBP eCLIP21.83■■□□□ 1.08
RFTN1-201ENST00000334133 RNF41Q9H4P4 317 aaPredicted RBP21.83■■□□□ 1.08
RFTN1-201ENST00000334133 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.08
RFTN1-201ENST00000334133 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
RFTN1-201ENST00000334133 PRDX5P30044 214 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 UBE4AQ14139 1066 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 CLEC4GQ6UXB4 293 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 ENAHQ8N8S7 591 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-201ENST00000334133 JMYQ8N9B5 988 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 ESR2Q92731 530 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 SHISA4Q96DD7 197 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 CABP5Q9NP86 173 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 PLEKHA8P1O95397 391 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
RFTN1-201ENST00000334133 BARGINQ6ZT62 677 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 FOXP4Q8IVH2 680 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-201ENST00000334133 GRAMD1CQ8IYS0 662 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 KCNH3Q9ULD8 1083 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 HPSEQ9Y251 543 aa21.82■■□□□ 1.08
RFTN1-201ENST00000334133 MYH2Q9UKX2 1941 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 PPP6R2O75170 966 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 CDC25BP30305 580 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 FAM47AQ5JRC9 791 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 SETDB2Q96T68 719 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 CICQ96RK0 1608 aaPredicted RBP21.81■■□□□ 1.08
RFTN1-201ENST00000334133 CYP2D6P10635 497 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 RPS8P62241 208 aaKnown RBP21.81■■□□□ 1.08
RFTN1-201ENST00000334133 USP49Q70CQ1 688 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 METTL16Q86W50 562 aaKnown RBP21.81■■□□□ 1.08
RFTN1-201ENST00000334133 CNNM3Q8NE01 707 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 NRAPQ86VF7 1730 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 TNNT1P13805 278 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 RESP18Q5W5W9 173 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 TMC6Q7Z403 805 aa21.81■■□□□ 1.08
RFTN1-201ENST00000334133 MECOMQ03112 1051 aa21.8■■□□□ 1.08
RFTN1-201ENST00000334133 NCAPHQ15003 741 aa21.8■■□□□ 1.08
RFTN1-201ENST00000334133 SEC23AQ15436 765 aa21.8■■□□□ 1.08
RFTN1-201ENST00000334133 V9GY48 417 aaPredicted RBP21.8■■□□□ 1.08
RFTN1-201ENST00000334133 NOM1Q5C9Z4 860 aaKnown RBP21.8■■□□□ 1.08
RFTN1-201ENST00000334133 EARS2Q5JPH6 523 aaKnown RBP21.8■■□□□ 1.08
RFTN1-201ENST00000334133 DEXIO95424 95 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 ZNF827Q17R98 1081 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 IFIT1BQ5T764 474 aaKnown RBP21.79■■□□□ 1.08
RFTN1-201ENST00000334133 KRI1Q8N9T8 703 aaKnown RBP21.79■■□□□ 1.08
RFTN1-201ENST00000334133 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 ZSCAN10Q96SZ4 725 aaPredicted RBP21.79■■□□□ 1.08
RFTN1-201ENST00000334133 PCDHA5Q9Y5H7 936 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 STK36Q9NRP7 1315 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 CTR9Q6PD62 1173 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 WASF1Q92558 559 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 PDCL3Q9H2J4 239 aa21.79■■□□□ 1.08
RFTN1-201ENST00000334133 ZNF710Q8N1W2 664 aa21.78■■□□□ 1.08
RFTN1-201ENST00000334133 GPR101Q96P66 508 aaPredicted RBP21.78■■□□□ 1.08
RFTN1-201ENST00000334133 POLR2DO15514 142 aaKnown RBP21.78■■□□□ 1.08
RFTN1-201ENST00000334133 ZPR1O75312 459 aa21.78■■□□□ 1.08
RFTN1-201ENST00000334133 RBM6P78332 1123 aaKnown RBP21.78■■□□□ 1.08
RFTN1-201ENST00000334133 CUTAO60888 179 aa21.78■■□□□ 1.08
RFTN1-201ENST00000334133 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
RFTN1-201ENST00000334133 KRBA2Q6ZNG9 492 aa21.78■■□□□ 1.08
RFTN1-201ENST00000334133 NSUN4Q96CB9 384 aaKnown RBP21.78■■□□□ 1.08
RFTN1-201ENST00000334133 CCZ1BP86790 482 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms