RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM13AO94988 1023 aa11.45□□□□□ -0.58
SPTBN1-201ENST00000333896 UBL4BQ8N7F7 174 aa11.45□□□□□ -0.58
SPTBN1-201ENST00000333896 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 RUBCNQ92622 972 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 CUL7Q14999 1698 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 POLE2P56282 527 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 IFT88Q13099 833 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 METTL24Q5JXM2 366 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 MAML3Q96JK9 1138 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 TTLL12Q14166 644 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 STXBP3O00186 592 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 CLSTN2Q9H4D0 955 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKIB1Q9P2G1 1089 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 CDR2Q01850 454 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 PODNQ7Z5L7 613 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 RGS16O15492 202 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 ETF1P62495 437 aaKnown RBP11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 PPP2R5DQ14738 602 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 FAM135AQ9P2D6 1515 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 IWS1Q96ST2 819 aa11.44□□□□□ -0.58
SPTBN1-201ENST00000333896 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 SKOR1P84550 965 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 FGD4Q96M96 766 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ARHGAP42A6NI28 874 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 DNM1Q05193 864 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD20A4Q4UJ75 823 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD20A8PQ5CZ79 823 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD20A2Q5SQ80 823 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD20A1Q5TYW2 823 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 CCDC125Q86Z20 511 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ZNF653Q96CK0 615 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 NSD2O96028 1365 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD50Q9ULJ7 1429 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 CCDC169A6NNP5 214 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 NUMA1Q14980 2115 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 KCNA4P22459 653 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 MGARPQ8TDB4 240 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ARHGEF9O43307 516 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 HARSP12081 509 aaKnown RBP11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 HOXA7P31268 230 aaPredicted RBP11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 SRGAP1Q7Z6B7 1085 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 STAMBPL1Q96FJ0 436 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 ANKRD27Q96NW4 1050 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 KRT3P12035 628 aa11.43□□□□□ -0.58
SPTBN1-201ENST00000333896 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 CROCCQ5TZA2 2017 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 RPS6KA2Q15349 733 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 HHATQ5VTY9 493 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 MSANTD4Q8NCY6 345 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 ARHGAP45Q92619 1136 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 NAP1L4Q99733 375 aaKnown RBP11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 SERPINB6P35237 376 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 AKNAD1Q5T1N1 836 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 MAP7D3Q8IWC1 876 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 SDCCAG3Q96C92 435 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 FGFR1OP2Q9NVK5 253 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 CTNNA1P35221 906 aaKnown RBP11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 NEK2P51955 445 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 RNASE9P60153 205 aaKnown RBP11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
SPTBN1-201ENST00000333896 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 CHGBP05060 677 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 ELF1P32519 619 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 TMEM67Q5HYA8 995 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 LMBRD1Q9NUN5 540 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 PDE6BP35913 854 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 IGSF22Q8N9C0 903 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 RNF41Q9H4P4 317 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 LGSNQ5TDP6 509 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 SRLQ86TD4 932 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 SPTLC2O15270 562 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 MCM10Q7L590 875 aa11.41□□□□□ -0.58
SPTBN1-201ENST00000333896 KRT75O95678 551 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms