RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 ZDHHC15Q96MV8 337 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 HSPA6P17066 643 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 WTAPQ15007 396 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 CCDC12Q8WUD4 166 aaPredicted RBP13.41□□□□□ -0.26
SHC4-201ENST00000332408 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
SHC4-201ENST00000332408 WNT10BO00744 389 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 SDSP20132 328 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 SLC1A4P43007 532 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 CASP7P55210 303 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 NMIQ13287 307 aaPredicted RBP13.4□□□□□ -0.26
SHC4-201ENST00000332408 ADM5C9JUS6 153 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 MCAMP43121 646 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 SMC5Q8IY18 1101 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 NT5C2P49902 561 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 FKBP1CQ5VVH2 108 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 TICAM2Q86XR7 235 aa13.4□□□□□ -0.26
SHC4-201ENST00000332408 PCP11498 1178 aaKnown RBP13.4□□□□□ -0.26
SHC4-201ENST00000332408 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 C5P01031 1676 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 CALM1P0DP23 149 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 CALM2P0DP24 149 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 CALM3P0DP25 149 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 RPAP1Q9BWH6 1393 aaPredicted RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 FLOT1O75955 427 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 NBPF11Q86T75 865 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 WASF1Q92558 559 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
SHC4-201ENST00000332408 MCM5P33992 734 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 UBXN2AP68543 259 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 MRIQ9BWK5 157 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
SHC4-201ENST00000332408 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 ADD2P35612 726 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 KCTD2Q14681 263 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 DPP9Q86TI2 863 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 C19orf81C9J6K1 198 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
SHC4-201ENST00000332408 SMC3Q9UQE7 1217 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 KCNA3P22001 575 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
SHC4-201ENST00000332408 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
SHC4-201ENST00000332408 NEK4P51957 841 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 PDS5AQ29RF7 1337 aaKnown RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 GDF11O95390 407 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 NUCB2P80303 420 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 PIH1D3Q9NQM4 214 aaKnown RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 CLIP2Q9UDT6 1046 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 KLRK1P26718 216 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 COPB2P35606 906 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 TFAP4Q01664 338 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 PPARAQ07869 468 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 JAKMIP1Q96N16 626 aaKnown RBP13.37□□□□□ -0.27
SHC4-201ENST00000332408 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
SHC4-201ENST00000332408 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 C4AP0C0L4 1744 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 PARP1P09874 1014 aaKnown RBP13.36□□□□□ -0.27
SHC4-201ENST00000332408 SPP2Q13103 211 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 NCAPG2Q86XI2 1143 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 IFNL3Q8IZI9 196 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
SHC4-201ENST00000332408 ITGB4P16144 1822 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
SHC4-201ENST00000332408 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
SHC4-201ENST00000332408 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 RBM27Q9P2N5 1060 aaKnown RBP13.36□□□□□ -0.27
SHC4-201ENST00000332408 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
SHC4-201ENST00000332408 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
SHC4-201ENST00000332408 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
SHC4-201ENST00000332408 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
SHC4-201ENST00000332408 RABEP1Q15276 862 aa13.35□□□□□ -0.27
SHC4-201ENST00000332408 SCYL3Q8IZE3 742 aa13.35□□□□□ -0.27
SHC4-201ENST00000332408 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
SHC4-201ENST00000332408 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms