RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 CHD4Q14839 1912 aa11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 AXDND1Q5T1B0 1012 aaPredicted RBP11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 CCDC112Q8NEF3 446 aa11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 KCNG4Q8TDN1 519 aa11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
PRAMEF1-201ENST00000332296 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 ZNF213O14771 459 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 CPLX1O14810 134 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 WDHD1O75717 1129 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 NTSR2O95665 410 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 CSF1RP07333 972 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 PFKFB1P16118 471 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 ABCC12Q96J65 1359 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 NEMFO60524 1076 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 ZNF202O95125 648 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 NFIXQ14938 502 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 FLAD1Q8NFF5 587 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 XPO4Q9C0E2 1151 aaKnown RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 GREM2Q9H772 168 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 PIH1D3Q9NQM4 214 aaKnown RBP11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
PRAMEF1-201ENST00000332296 CDHR2Q9BYE9 1310 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 ADD2P35612 726 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 NCAPHQ15003 741 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 CCAR2Q8N163 923 aaKnown RBP11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 NAT10Q9H0A0 1025 aaKnown RBP11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 IFNKQ9P0W0 207 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 CASZ1Q86V15 1759 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 ZMYM6O95789 1325 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
PRAMEF1-201ENST00000332296 UBE2Q2LH0YL09 131 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 DHX16O60231 1041 aaKnown RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 SMC2O95347 1197 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 ITGA6P23229 1130 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 CDC27P30260 824 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 SYCP1Q15431 976 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 ERFEQ4G0M1 354 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 CCDC24Q8N4L8 307 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 OSBPL5Q9H0X9 879 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 GOLGB1Q14789 3259 aaKnown RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 WDR19Q8NEZ3 1342 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 SH2B2O14492 632 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 NPHP1O15259 732 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 NLRP12P59046 1061 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 VPS37DQ86XT2 251 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 VGLL2Q8N8G2 317 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 PHKBQ93100 1093 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 BPIFA3Q9BQP9 254 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 ALG1Q9BT22 464 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 V9GYY5 206 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 ARAP2Q8WZ64 1704 aa11.62□□□□□ -0.55
PRAMEF1-201ENST00000332296 B4E1Z4 1266 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 METAP2P50579 478 aaKnown RBP eCLIP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 LDHAL6AQ6ZMR3 332 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 SYNE3Q6ZMZ3 975 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 MICU3Q86XE3 530 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 CRISPLD2Q9H0B8 497 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 INCENPQ9NQS7 918 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 ZNF215Q9UL58 517 aaPredicted RBP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 DOCK2Q92608 1830 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 LAMB2P55268 1798 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 LRP5O75197 1615 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 PDE8AO60658 829 aa11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 IDH1O75874 414 aaKnown RBP11.61□□□□□ -0.55
PRAMEF1-201ENST00000332296 CMA1P23946 247 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms