RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
EFCAB13-201ENST00000331493 WASF1Q92558 559 aa13.5□□□□□ -0.25
EFCAB13-201ENST00000331493 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
EFCAB13-201ENST00000331493 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 CUTAO60888 179 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 XBP1P17861 261 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 EVCP57679 992 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 NCAPHQ15003 741 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 EPB41L4AQ9HCS5 686 aaPredicted RBP13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 ZSCAN12O43309 604 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 KRT23Q9C075 422 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 CSRNP2Q9H175 543 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 FAM47AQ5JRC9 791 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 IGDCC4Q8TDY8 1250 aa13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
EFCAB13-201ENST00000331493 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 MTF1Q14872 753 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 OSBPL5Q9H0X9 879 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 TRIM75PA6NK02 468 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 MCM7P33993 719 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 FANCBQ8NB91 859 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 VPS16Q9H269 839 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 LMO7Q8WWI1 1683 aa13.48□□□□□ -0.25
EFCAB13-201ENST00000331493 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 PPP2R2CQ9Y2T4 447 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 TNKSO95271 1327 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 CCDC196A0A1B0GTZ2 297 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 KIF4BQ2VIQ3 1234 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 TOGARAM2Q6ZUX3 1019 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 CLCN6P51797 869 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 NLRP5P59047 1200 aa13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
EFCAB13-201ENST00000331493 MAGEB6P1A0A0J9YX57 407 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 GSG1L2A8MUP6 293 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 CCP110O43303 1012 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 CATIPQ7Z7H3 387 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 NOL10Q9BSC4 688 aaKnown RBP13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 CNNM2Q9H8M5 875 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 TEX33O43247 280 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 CSF1RP07333 972 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 TPM1P09493 284 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 FILIP1LQ4L180 1135 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 ESR2Q92731 530 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
EFCAB13-201ENST00000331493 N4BP3O15049 544 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 NMT2O60551 498 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 ERCC3P19447 782 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 PPARAQ07869 468 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 PTPAQ15257 358 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 NOM1Q5C9Z4 860 aaKnown RBP13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 RRAGBQ5VZM2 374 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 IQCA1Q86XH1 822 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 WDR24Q96S15 920 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
EFCAB13-201ENST00000331493 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 PLEKHA8P1O95397 391 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 MMP1P03956 469 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 NUP88Q99567 741 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 C5P01031 1676 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 PPP6R2O75170 966 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 DEXIO95424 95 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 MCM6Q14566 821 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 VSTM4Q8IW00 320 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 IGSF22Q8N9C0 903 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 FAM217BQ9NTX9 383 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 SPECC1LQ69YQ0 1117 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 HINFPQ9BQA5 517 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 RNF41Q9H4P4 317 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 AATFQ9NY61 560 aaKnown RBP eCLIP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 IKBKBO14920 756 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 BMP6P22004 513 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 CHRNDQ07001 517 aa13.45□□□□□ -0.26
EFCAB13-201ENST00000331493 USP17L12C9JPN9 530 aa13.44□□□□□ -0.26
EFCAB13-201ENST00000331493 USP17L21D6R901 530 aa13.44□□□□□ -0.26
EFCAB13-201ENST00000331493 FMNL1O95466 1100 aaPredicted RBP13.44□□□□□ -0.26
EFCAB13-201ENST00000331493 RHOXF2BP0C7M4 288 aa13.44□□□□□ -0.26
EFCAB13-201ENST00000331493 GYS2P54840 703 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms