RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 GPR108Q9NPR9 543 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 SNRKQ9NRH2 765 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 AGTPBP1Q9UPW5 1226 aa28.59■■■□□ 2.17
TMEM54-201ENST00000329151 COL2A1P02458 1487 aaPredicted RBP28.59■■■□□ 2.17
TMEM54-201ENST00000329151 MAST2Q6P0Q8 1798 aa28.58■■■□□ 2.17
TMEM54-201ENST00000329151 TNPO2O14787 897 aaKnown RBP28.58■■■□□ 2.17
TMEM54-201ENST00000329151 TNNI3KQ59H18 835 aa28.58■■■□□ 2.17
TMEM54-201ENST00000329151 ZNF384Q8TF68 577 aa28.58■■■□□ 2.17
TMEM54-201ENST00000329151 FPGT-TNNI3KV9GXZ4 949 aa28.58■■■□□ 2.17
TMEM54-201ENST00000329151 SLURP2P0DP57 97 aa28.57■■■□□ 2.16
TMEM54-201ENST00000329151 MTFR1Q15390 333 aa28.57■■■□□ 2.16
TMEM54-201ENST00000329151 RNF208Q9H0X6 261 aa28.57■■■□□ 2.16
TMEM54-201ENST00000329151 AS3MTQ9HBK9 375 aa28.57■■■□□ 2.16
TMEM54-201ENST00000329151 HERC5Q9UII4 1024 aaKnown RBP28.57■■■□□ 2.16
TMEM54-201ENST00000329151 ATP8B2P98198 1209 aa28.56■■■□□ 2.16
TMEM54-201ENST00000329151 CCDC84Q86UT8 332 aaPredicted RBP28.56■■■□□ 2.16
TMEM54-201ENST00000329151 ZNF280CQ8ND82 737 aa28.56■■■□□ 2.16
TMEM54-201ENST00000329151 DHX36Q9H2U1 1008 aaKnown RBP28.56■■■□□ 2.16
TMEM54-201ENST00000329151 AATFQ9NY61 560 aaKnown RBP eCLIP28.56■■■□□ 2.16
TMEM54-201ENST00000329151 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.56■■■□□ 2.16
TMEM54-201ENST00000329151 TAOK2Q9UL54 1235 aa28.56■■■□□ 2.16
TMEM54-201ENST00000329151 CCL5P13501 91 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 SPP2Q13103 211 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 HABP4Q5JVS0 413 aaKnown RBP28.55■■■□□ 2.16
TMEM54-201ENST00000329151 PROCA1Q8NCQ7 364 aaPredicted RBP28.55■■■□□ 2.16
TMEM54-201ENST00000329151 SH3RF3Q8TEJ3 882 aaPredicted RBP28.55■■■□□ 2.16
TMEM54-201ENST00000329151 COA7Q96BR5 231 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 DBNDD2Q9BQY9 259 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 C1orf115Q9H7X2 142 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 PI4KBQ9UBF8 816 aa28.55■■■□□ 2.16
TMEM54-201ENST00000329151 POLA2Q14181 598 aa28.54■■■□□ 2.16
TMEM54-201ENST00000329151 CRACR2BQ8N4Y2 399 aaPredicted RBP28.54■■■□□ 2.16
TMEM54-201ENST00000329151 SSH3Q8TE77 659 aa28.54■■■□□ 2.16
TMEM54-201ENST00000329151 USP17L5A8MUK1 530 aa28.53■■■□□ 2.16
TMEM54-201ENST00000329151 ADCY3O60266 1144 aa28.53■■■□□ 2.16
TMEM54-201ENST00000329151 CAP2P40123 477 aa28.53■■■□□ 2.16
TMEM54-201ENST00000329151 ANKRD13CQ8N6S4 541 aa28.53■■■□□ 2.16
TMEM54-201ENST00000329151 GJB1P08034 283 aa28.52■■■□□ 2.16
TMEM54-201ENST00000329151 DPF3Q92784 378 aa28.52■■■□□ 2.16
TMEM54-201ENST00000329151 GABRQQ9UN88 632 aa28.52■■■□□ 2.16
TMEM54-201ENST00000329151 FLT3LGP49771 235 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 HMGCS2P54868 508 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 TREML2Q5T2D2 321 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 MAPKAPK5Q8IW41 473 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 TGFBRAP1Q8WUH2 860 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 HTATIP2Q9BUP3 242 aa28.51■■■□□ 2.15
TMEM54-201ENST00000329151 IGSF3O75054 1194 aa28.5■■■□□ 2.15
TMEM54-201ENST00000329151 HLA-DOAP06340 250 aa28.5■■■□□ 2.15
TMEM54-201ENST00000329151 GJA8P48165 433 aa28.5■■■□□ 2.15
TMEM54-201ENST00000329151 GCLCP48506 637 aaPredicted RBP28.5■■■□□ 2.15
TMEM54-201ENST00000329151 TMOD4Q9NZQ9 345 aa28.5■■■□□ 2.15
TMEM54-201ENST00000329151 MYO5AQ9Y4I1 1855 aaKnown RBP28.5■■■□□ 2.15
TMEM54-201ENST00000329151 LOC285556D6RIA3 1793 aa28.5■■■□□ 2.15
TMEM54-201ENST00000329151 DOCK3Q8IZD9 2030 aa28.49■■■□□ 2.15
TMEM54-201ENST00000329151 ASNSP08243 561 aa28.49■■■□□ 2.15
TMEM54-201ENST00000329151 FAM110CQ1W6H9 321 aa28.49■■■□□ 2.15
TMEM54-201ENST00000329151 CDK5RAP2Q96SN8 1893 aa28.49■■■□□ 2.15
TMEM54-201ENST00000329151 CYP2E1P05181 493 aaPredicted RBP28.48■■■□□ 2.15
TMEM54-201ENST00000329151 ZAP70P43403 619 aa28.48■■■□□ 2.15
TMEM54-201ENST00000329151 ZNF512BQ96KM6 892 aaPredicted RBP28.48■■■□□ 2.15
TMEM54-201ENST00000329151 ELNP15502 786 aa28.47■■■□□ 2.15
TMEM54-201ENST00000329151 PPP4CP60510 307 aa28.47■■■□□ 2.15
TMEM54-201ENST00000329151 IRX3P78415 501 aaPredicted RBP28.47■■■□□ 2.15
TMEM54-201ENST00000329151 FOXP4Q8IVH2 680 aaPredicted RBP28.47■■■□□ 2.15
TMEM54-201ENST00000329151 PXYLP1Q8TE99 480 aa28.47■■■□□ 2.15
TMEM54-201ENST00000329151 SHISA4Q96DD7 197 aa28.47■■■□□ 2.15
TMEM54-201ENST00000329151 CCDC8Q9H0W5 538 aaPredicted RBP28.47■■■□□ 2.15
TMEM54-201ENST00000329151 FOCADQ5VW36 1801 aa28.47■■■□□ 2.15
TMEM54-201ENST00000329151 FLT1P17948 1338 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 IDH1O75874 414 aaKnown RBP28.46■■■□□ 2.15
TMEM54-201ENST00000329151 CYP7A1P22680 504 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 IRF5Q13568 498 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 CERS3Q8IU89 383 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 ERC1Q8IUD2 1116 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 U2AF1L4Q8WU68 220 aaKnown RBP28.46■■■□□ 2.15
TMEM54-201ENST00000329151 UNC93B1Q9H1C4 597 aa28.46■■■□□ 2.15
TMEM54-201ENST00000329151 NOP58Q9Y2X3 529 aaKnown RBP28.46■■■□□ 2.15
TMEM54-201ENST00000329151 INHAP05111 366 aa28.45■■■□□ 2.14
TMEM54-201ENST00000329151 MYH1P12882 1939 aa28.44■■■□□ 2.14
TMEM54-201ENST00000329151 H0YGN5 161 aa28.44■■■□□ 2.14
TMEM54-201ENST00000329151 FARP2O94887 1054 aaPredicted RBP28.44■■■□□ 2.14
TMEM54-201ENST00000329151 MTMR2Q13614 643 aa28.44■■■□□ 2.14
TMEM54-201ENST00000329151 DIEXFQ68CQ4 756 aaKnown RBP28.44■■■□□ 2.14
TMEM54-201ENST00000329151 ASCC2Q9H1I8 757 aaPredicted RBP28.44■■■□□ 2.14
TMEM54-201ENST00000329151 GINM1Q9NU53 330 aa28.44■■■□□ 2.14
TMEM54-201ENST00000329151 SAP30BPQ9UHR5 308 aaKnown RBP28.44■■■□□ 2.14
TMEM54-201ENST00000329151 DBNLQ9UJU6 430 aaKnown RBP28.44■■■□□ 2.14
TMEM54-201ENST00000329151 PALD1Q9ULE6 856 aa28.44■■■□□ 2.14
TMEM54-201ENST00000329151 ZBTB7BO15156 539 aaPredicted RBP28.43■■■□□ 2.14
TMEM54-201ENST00000329151 TFRCP02786 760 aaKnown RBP28.43■■■□□ 2.14
TMEM54-201ENST00000329151 CAPN2P17655 700 aa28.43■■■□□ 2.14
TMEM54-201ENST00000329151 USP5P45974 858 aa28.43■■■□□ 2.14
TMEM54-201ENST00000329151 WDR18Q9BV38 432 aa28.43■■■□□ 2.14
TMEM54-201ENST00000329151 PIH1D3Q9NQM4 214 aaKnown RBP28.43■■■□□ 2.14
TMEM54-201ENST00000329151 NR2E3Q9Y5X4 410 aa28.43■■■□□ 2.14
TMEM54-201ENST00000329151 TRIOBPQ9H2D6 2365 aa28.42■■■□□ 2.14
TMEM54-201ENST00000329151 SGPL1O95470 568 aa28.42■■■□□ 2.14
TMEM54-201ENST00000329151 BACE1P56817 501 aa28.42■■■□□ 2.14
TMEM54-201ENST00000329151 MAP3K12Q12852 859 aa28.42■■■□□ 2.14
TMEM54-201ENST00000329151 SH3D19Q5HYK7 790 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms