RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 FRMPD2Q68DX3 1309 aaPredicted RBP18.29■□□□□ 0.52
SYNM-201ENST00000328642 CACNB3P54284 484 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 MECOMQ03112 1051 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 UBE4AQ14139 1066 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 ZSCAN10Q96SZ4 725 aaPredicted RBP18.28■□□□□ 0.52
SYNM-201ENST00000328642 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
SYNM-201ENST00000328642 IFT172Q9UG01 1749 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 ARHGAP29Q52LW3 1261 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 SERTAD1Q9UHV2 236 aa18.28■□□□□ 0.52
SYNM-201ENST00000328642 USP17L3A6NCW0 530 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 USP17L4A6NCW7 530 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 USP17L1Q7RTZ2 530 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 PKD2L1Q9P0L9 805 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 TRIM47Q96LD4 638 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
SYNM-201ENST00000328642 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.51
SYNM-201ENST00000328642 MTIF2P46199 727 aaKnown RBP18.27■□□□□ 0.51
SYNM-201ENST00000328642 ARHGAP23Q9P227 1491 aa18.27■□□□□ 0.51
SYNM-201ENST00000328642 CDC27P30260 824 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 BTDP43251 543 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 ASIC1P78348 528 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 RESTQ13127 1097 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 TXKP42681 527 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 CHMP4BP1P59074 171 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 C11orf57Q6ZUT1 292 aaPredicted RBP18.26■□□□□ 0.51
SYNM-201ENST00000328642 FCHSD1Q86WN1 690 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 KLRK1P26718 216 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
SYNM-201ENST00000328642 CBX1P83916 185 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 GOLGA8FQ08AF8 430 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 GOLGA8DPQ0D2H9 430 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 RILPL1Q5EBL4 403 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 MMRN2Q9H8L6 949 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 ZNHIT6Q9NWK9 470 aaKnown RBP18.25■□□□□ 0.51
SYNM-201ENST00000328642 COL15A1P39059 1388 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
SYNM-201ENST00000328642 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 AFF2P51816 1311 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 PLEKHA8P1O95397 391 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 KARSQ15046 597 aaKnown RBP18.25■□□□□ 0.51
SYNM-201ENST00000328642 TTC38Q5R3I4 469 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 EYA3Q99504 573 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 USP40Q9NVE5 1235 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 MRVI1Q9Y6F6 885 aa18.25■□□□□ 0.51
SYNM-201ENST00000328642 CASP1P29466 404 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
SYNM-201ENST00000328642 VPS16Q9H269 839 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 DNAI1Q9UI46 699 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 ZMYM6O95789 1325 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 TRIM28Q13263 835 aaKnown RBP18.24■□□□□ 0.51
SYNM-201ENST00000328642 TCERG1LQ5VWI1 586 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 ADALQ6DHV7 355 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 DTHD1Q6ZMT9 781 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 CALM1P0DP23 149 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 CALM2P0DP24 149 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 CALM3P0DP25 149 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 DPCR1Q3MIW9 517 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 SMYD4Q8IYR2 804 aaPredicted RBP18.24■□□□□ 0.51
SYNM-201ENST00000328642 ELP1O95163 1332 aa18.24■□□□□ 0.51
SYNM-201ENST00000328642 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 ARID4AP29374 1257 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 PRKG1Q13976 671 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 INF2Q27J81 1249 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 USH1GQ495M9 461 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 KIF18AQ8NI77 898 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 RRP36Q96EU6 259 aaKnown RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 BIN2Q9UBW5 565 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 CPDO75976 1380 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 GNG11P61952 73 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 CALML4Q96GE6 196 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 ZNF75DP51815 510 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 TMEM266Q2M3C6 531 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 ZNF771Q7L3S4 317 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 KIAA1468Q9P260 1216 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 SLIT1O75093 1534 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 CCNT1O60563 726 aaKnown RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 TEX35Q5T0J7 233 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 TRPC5Q9UL62 973 aaPredicted RBP18.23■□□□□ 0.51
SYNM-201ENST00000328642 NFE2L3Q9Y4A8 694 aa18.23■□□□□ 0.51
SYNM-201ENST00000328642 GUCY1A2P33402 732 aa18.22■□□□□ 0.51
SYNM-201ENST00000328642 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms