RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
COL4A5-201ENST00000328300 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
COL4A5-201ENST00000328300 LIG1P18858 919 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 AOPEPQ8N6M6 819 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
COL4A5-201ENST00000328300 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
COL4A5-201ENST00000328300 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 SLC5A4Q9NY91 659 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
COL4A5-201ENST00000328300 RGS12O14924 1447 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 ZMYM6O95789 1325 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 CTNNA2P26232 953 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 CRB1P82279 1406 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 PLCD4Q9BRC7 762 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 TTF2Q9UNY4 1162 aaKnown RBP12.85□□□□□ -0.35
COL4A5-201ENST00000328300 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 CCDC175P0C221 793 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 KRT86O43790 486 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
COL4A5-201ENST00000328300 TFAP4Q01664 338 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 ACTN2P35609 894 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 KRT40Q6A162 431 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
COL4A5-201ENST00000328300 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
COL4A5-201ENST00000328300 POLA2Q14181 598 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 NLRP10Q86W26 655 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 STX10O60499 249 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 TUBB2AQ13885 445 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 TGFBRAP1Q8WUH2 860 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
COL4A5-201ENST00000328300 TUBB2BQ9BVA1 445 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 MCF2L2Q86YR7 1114 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
COL4A5-201ENST00000328300 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 CHMP4BP1P59074 171 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 MTX1Q13505 466 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 SLC27A3Q5K4L6 730 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.35
COL4A5-201ENST00000328300 H7C1W4 665 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 BACH1O14867 736 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 SERPINB2P05120 415 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 GTF2IP78347 998 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 REXO1Q8N1G1 1221 aaKnown RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 USP32Q8NFA0 1604 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 HSPD1P10809 573 aaKnown RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 CEP83Q9Y592 693 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 JCADQ9P266 1359 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 SNX16P57768 344 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 CEP112Q8N8E3 955 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 GREM2Q9H772 168 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 ADCY9O60503 1353 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL4A5-201ENST00000328300 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
COL4A5-201ENST00000328300 H0YCG3 227 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 NPR1P16066 1061 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 ZNF174Q15697 407 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 LRWD1Q9UFC0 647 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 SPATA31A6Q5VVP1 1343 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 SKILP12757 684 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 TECPR2O15040 1411 aa12.82□□□□□ -0.36
COL4A5-201ENST00000328300 PIGBQ92521 554 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms