RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CARD6Q9BX69 1037 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 CBX8Q9HC52 389 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 GPCPD1Q9NPB8 672 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 CCDC169A6NNP5 214 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 ARHGAP24Q8N264 748 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 IQCDQ96DY2 449 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 POLR2DO15514 142 aaKnown RBP23.43■■□□□ 1.34
RNF40-201ENST00000324685 ARHGAP25P42331 645 aa23.43■■□□□ 1.34
RNF40-201ENST00000324685 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 RIOK3O14730 519 aaKnown RBP23.42■■□□□ 1.34
RNF40-201ENST00000324685 PCK1P35558 622 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 CPA1P15085 419 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 SP4Q02446 784 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 JDP2Q8WYK2 163 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 APPBP2Q92624 585 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 RIMBP2O15034 1052 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 KRT25Q7Z3Z0 450 aa23.42■■□□□ 1.34
RNF40-201ENST00000324685 SAP30BPQ9UHR5 308 aaKnown RBP23.42■■□□□ 1.34
RNF40-201ENST00000324685 GOLGA6BA6NDN3 693 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 GABPB1Q06547 395 aaPredicted RBP23.41■■□□□ 1.34
RNF40-201ENST00000324685 CCDC62Q6P9F0 684 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 FCHSD1Q86WN1 690 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 PLBD2Q8NHP8 589 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 ZBTB9Q96C00 473 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 ARHGEF10LQ9HCE6 1279 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.41■■□□□ 1.34
RNF40-201ENST00000324685 IRX3P78415 501 aaPredicted RBP23.41■■□□□ 1.34
RNF40-201ENST00000324685 CASQ2O14958 399 aaPredicted RBP23.41■■□□□ 1.34
RNF40-201ENST00000324685 TSNAXIP1Q2TAA8 658 aa23.41■■□□□ 1.34
RNF40-201ENST00000324685 DIS3L2Q8IYB7 885 aaKnown RBP23.41■■□□□ 1.34
RNF40-201ENST00000324685 FEZ2Q9UHY8 353 aaPredicted RBP23.41■■□□□ 1.34
RNF40-201ENST00000324685 ARHGEF35A5YM69 484 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 ZNF445P59923 1031 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.4■■□□□ 1.348e-8■■□□□ 14.5
RNF40-201ENST00000324685 PKD2L1Q9P0L9 805 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 V9GY48 417 aaPredicted RBP23.4■■□□□ 1.34
RNF40-201ENST00000324685 ITSN2Q9NZM3 1697 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 CHMP2AO43633 222 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 BUB1BO60566 1050 aaPredicted RBP23.4■■□□□ 1.34
RNF40-201ENST00000324685 HARSP12081 509 aaKnown RBP23.4■■□□□ 1.34
RNF40-201ENST00000324685 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 TRPM2O94759 1503 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 GPATCH8Q9UKJ3 1502 aaKnown RBP23.4■■□□□ 1.34
RNF40-201ENST00000324685 LGSNQ5TDP6 509 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 HHATQ5VTY9 493 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 MCUR1Q96AQ8 359 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 PFDN4Q9NQP4 134 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 PARP10Q53GL7 1025 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 RNF34Q969K3 372 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 NUCKS1Q9H1E3 243 aaKnown RBP23.4■■□□□ 1.34
RNF40-201ENST00000324685 CTTNBP2NLQ9P2B4 639 aa23.4■■□□□ 1.34
RNF40-201ENST00000324685 TXKP42681 527 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 MIPOL1Q8TD10 442 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 MAIP1Q8WWC4 291 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 LZTS2Q9BRK4 669 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 ZNF202O95125 648 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 MYRIPQ8NFW9 859 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 METTL22Q9BUU2 404 aaPredicted RBP23.39■■□□□ 1.34
RNF40-201ENST00000324685 CLEC11AQ9Y240 323 aa23.39■■□□□ 1.34
RNF40-201ENST00000324685 SEC24BO95487 1268 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 NONOQ15233 471 aaKnown RBP eCLIP23.39■■□□□ 1.33
RNF40-201ENST00000324685 CFAP221Q4G0U5 840 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 CDAN1Q8IWY9 1227 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 ASIC3Q9UHC3 531 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 MAST3O60307 1309 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
RNF40-201ENST00000324685 DAPK3O43293 454 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 ADCY7P51828 1080 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 EYA1Q99502 592 aa23.39■■□□□ 1.33
RNF40-201ENST00000324685 FLOT1O75955 427 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 ITGA6P23229 1130 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 MAGEA1P43355 309 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 PPFIA1Q13136 1202 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 POSTNQ15063 836 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 SDCCAG8Q86SQ7 713 aaPredicted RBP23.38■■□□□ 1.33
RNF40-201ENST00000324685 TBC1D31Q96DN5 1066 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 CEP104O60308 925 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 ZNF131P52739 623 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 ELF2Q15723 593 aa23.38■■□□□ 1.33
RNF40-201ENST00000324685 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
RNF40-201ENST00000324685 RNASE9P60153 205 aaKnown RBP23.38■■□□□ 1.33
RNF40-201ENST00000324685 I3L4J1 428 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 IGSF3O75054 1194 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 VSIG1Q86XK7 387 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 VCXQ9H320 206 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 LRWD1Q9UFC0 647 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 NCAPH2Q6IBW4 605 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 XAGE2Q96GT9 111 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 HOXB7P09629 217 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 BCRP11274 1271 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 RBM26Q5T8P6 1007 aaKnown RBP23.37■■□□□ 1.33
RNF40-201ENST00000324685 SNX29Q8TEQ0 813 aa23.37■■□□□ 1.33
RNF40-201ENST00000324685 HOXC9P31274 260 aa23.36■■□□□ 1.33
RNF40-201ENST00000324685 SFMBT2Q5VUG0 894 aa23.36■■□□□ 1.33
RNF40-201ENST00000324685 CPSF2Q9P2I0 782 aaKnown RBP23.36■■□□□ 1.33
RNF40-201ENST00000324685 PARP2Q9UGN5 583 aa23.36■■□□□ 1.33
RNF40-201ENST00000324685 SRGAP1Q7Z6B7 1085 aa23.36■■□□□ 1.33
RNF40-201ENST00000324685 CEP120Q8N960 986 aa23.36■■□□□ 1.33
RNF40-201ENST00000324685 NELFBQ8WX92 580 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms