RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 KIF22Q14807 665 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
TPM3-204ENST00000323144 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 LRP2BPQ9P2M1 347 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 AFG3L2Q9Y4W6 797 aa15.17■□□□□ 0.02
TPM3-204ENST00000323144 ALPK3Q96L96 1907 aa15.16■□□□□ 0.02
TPM3-204ENST00000323144 CXCL11O14625 94 aa15.16■□□□□ 0.02
TPM3-204ENST00000323144 PSMC4P43686 418 aa15.16■□□□□ 0.02
TPM3-204ENST00000323144 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
TPM3-204ENST00000323144 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
TPM3-204ENST00000323144 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
TPM3-204ENST00000323144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
TPM3-204ENST00000323144 NOP58Q9Y2X3 529 aaKnown RBP15.16■□□□□ 0.02
TPM3-204ENST00000323144 MYPNQ86TC9 1320 aa15.16■□□□□ 0.02
TPM3-204ENST00000323144 FRMPD3Q5JV73 1810 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 CTNND1O60716 968 aaKnown RBP15.15■□□□□ 0.02
TPM3-204ENST00000323144 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
TPM3-204ENST00000323144 PRKCZQ05513 592 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 MAPKAPK5Q8IW41 473 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 EAF2Q96CJ1 260 aaPredicted RBP15.15■□□□□ 0.02
TPM3-204ENST00000323144 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 SRRDQ9UH36 339 aa15.15■□□□□ 0.02
TPM3-204ENST00000323144 A0A0G2JMZ2 1700 aa15.14■□□□□ 0.01
TPM3-204ENST00000323144 LDHCP07864 332 aa15.14■□□□□ 0.01
TPM3-204ENST00000323144 DYNLL1P63167 89 aaKnown RBP15.14■□□□□ 0.01
TPM3-204ENST00000323144 ARHGEF6Q15052 776 aa15.14■□□□□ 0.01
TPM3-204ENST00000323144 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
TPM3-204ENST00000323144 DOCK3Q8IZD9 2030 aa15.14■□□□□ 0.01
TPM3-204ENST00000323144 BAZ2AQ9UIF9 1905 aaKnown RBP15.13■□□□□ 0.01
TPM3-204ENST00000323144 TBC1D12O60347 775 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 JAG1P78504 1218 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 MTFR1Q15390 333 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 TGFBRAP1Q8WUH2 860 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
TPM3-204ENST00000323144 SAP30BPQ9UHR5 308 aaKnown RBP15.13■□□□□ 0.01
TPM3-204ENST00000323144 GABRQQ9UN88 632 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
TPM3-204ENST00000323144 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
TPM3-204ENST00000323144 MAP4K4O95819 1239 aaPredicted RBP15.12■□□□□ 0.01
TPM3-204ENST00000323144 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
TPM3-204ENST00000323144 MIGA1Q8NAN2 632 aa15.12■□□□□ 0.01
TPM3-204ENST00000323144 ZNF512BQ96KM6 892 aaPredicted RBP15.12■□□□□ 0.01
TPM3-204ENST00000323144 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
TPM3-204ENST00000323144 IL1RAPL2Q9NP60 686 aa15.12■□□□□ 0.01
TPM3-204ENST00000323144 PARP14Q460N5 1801 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
TPM3-204ENST00000323144 GDF11O95390 407 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 GNRH1P01148 92 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 CAP2P40123 477 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 HMGCS2P54868 508 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 PRMT2P55345 433 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 FCGRTP55899 365 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 AACSQ86V21 672 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 SMCR8Q8TEV9 937 aaPredicted RBP15.11■□□□□ 0.01
TPM3-204ENST00000323144 TMEM106CQ9BVX2 250 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 SLC45A1Q9Y2W3 748 aa15.11■□□□□ 0.01
TPM3-204ENST00000323144 CYP7A1P22680 504 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 SPP2Q13103 211 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 MTMR2Q13614 643 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 RAET1EQ8TD07 263 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 HERC5Q9UII4 1024 aaKnown RBP15.1■□□□□ 0.01
TPM3-204ENST00000323144 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 COG6Q9Y2V7 657 aa15.1■□□□□ 0.01
TPM3-204ENST00000323144 APBB1O00213 710 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 BAG3O95817 575 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 ELNP15502 786 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 PLCG2P16885 1265 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 GRK4P32298 578 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 PPP4CP60510 307 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 ANKRD13CQ8N6S4 541 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 MAGEB6Q8N7X4 407 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 PROCA1Q8NCQ7 364 aaPredicted RBP15.09■□□□□ 0.01
TPM3-204ENST00000323144 ZNF280CQ8ND82 737 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 ZBTB21Q9ULJ3 1066 aa15.09■□□□□ 0.01
TPM3-204ENST00000323144 USP17L5A8MUK1 530 aa15.08■□□□□ 0
TPM3-204ENST00000323144 PEX10O60683 326 aa15.08■□□□□ 0
TPM3-204ENST00000323144 CCL5P13501 91 aa15.08■□□□□ 0
TPM3-204ENST00000323144 EVX2Q03828 476 aa15.08■□□□□ 0
TPM3-204ENST00000323144 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
TPM3-204ENST00000323144 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
TPM3-204ENST00000323144 TNPO2O14787 897 aaKnown RBP15.07■□□□□ 0
TPM3-204ENST00000323144 FLT3LGP49771 235 aa15.07■□□□□ 0
TPM3-204ENST00000323144 FAM110CQ1W6H9 321 aa15.07■□□□□ 0
TPM3-204ENST00000323144 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
TPM3-204ENST00000323144 CRACR2BQ8N4Y2 399 aaPredicted RBP15.07■□□□□ 0
TPM3-204ENST00000323144 RHPN1Q8TCX5 695 aa15.07■□□□□ 0
TPM3-204ENST00000323144 DHX36Q9H2U1 1008 aaKnown RBP15.07■□□□□ 0
TPM3-204ENST00000323144 PNMA3Q9UL41 463 aa15.07■□□□□ 0
TPM3-204ENST00000323144 RLFQ13129 1914 aa15.06■□□□□ 0
TPM3-204ENST00000323144 INHAP05111 366 aa15.06■□□□□ 0
TPM3-204ENST00000323144 HOXD10P28358 340 aa15.06■□□□□ 0
TPM3-204ENST00000323144 SH3D19Q5HYK7 790 aa15.06■□□□□ 0
TPM3-204ENST00000323144 METTL16Q86W50 562 aaKnown RBP15.06■□□□□ 0
TPM3-204ENST00000323144 SLAIN1Q8ND83 568 aa15.06■□□□□ 0
TPM3-204ENST00000323144 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
TPM3-204ENST00000323144 BCL11AQ9H165 835 aa15.06■□□□□ 0
TPM3-204ENST00000323144 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms