RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 TSC22D3Q99576 134 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CNOT10Q9H9A5 744 aaKnown RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 STK38LQ9Y2H1 464 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 TRAF1Q13077 416 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 MFSD6Q6ZSS7 791 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 TESK2Q96S53 571 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 HOMER2Q9NSB8 354 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 IFIT3O14879 490 aaKnown RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CTNNA2P26232 953 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 DHX32Q7L7V1 743 aaKnown RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 C16orf71Q8IYS4 520 aaPredicted RBP7.87□□□□□ -1.15
SMC1A-201ENST00000322213 CCHCR1Q8TD31 782 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 KRT23Q9C075 422 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 KCNK9Q9NPC2 374 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 ZBTB43O43298 467 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 ATP1A2P50993 1020 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 PPP1R7Q15435 360 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
SMC1A-201ENST00000322213 ATP7AQ04656 1500 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SPEF2Q9C093 1822 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 CHUKO15111 745 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 UBL4BQ8N7F7 174 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 KCNH3Q9ULD8 1083 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ATP2A2P16615 1042 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 RUBCNQ92622 972 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 CTDP1Q9Y5B0 961 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 RTL9Q8NET4 1388 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 MAGI3Q5TCQ9 1506 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ZBTB7BO15156 539 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SEC31AO94979 1220 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 P3H4Q92791 437 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SMIM23A6NLE4 172 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SLC52A1Q9NWF4 448 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ANAPC4Q9UJX5 808 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 KIF13BQ9NQT8 1826 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ARID1AO14497 2285 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 TMTC2Q8N394 836 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ZNF513Q8N8E2 541 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 PLEKHA4Q9H4M7 779 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 CHCHD3Q9NX63 227 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 DBF4Q9UBU7 674 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SETBP1Q9Y6X0 1596 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 ANO1Q5XXA6 986 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SYCE1Q8N0S2 351 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 SAAL1Q96ER3 474 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 KLF18A0A0U1RQI7 1052 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 IDH1O75874 414 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 IFIT1P09914 478 aaKnown RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC144CPQ8IYA2 1237 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 GBP7Q8N8V2 638 aaPredicted RBP7.86□□□□□ -1.15
SMC1A-201ENST00000322213 LTN1O94822 1766 aa7.86□□□□□ -1.15
SMC1A-201ENST00000322213 KRT2P35908 639 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 PPP1R2P41236 205 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 NMIQ13287 307 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 Q9H521 79 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CACNA1CQ13936 2221 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 POLR2DO15514 142 aaKnown RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 RTN1Q16799 776 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 TBC1D22AQ8WUA7 517 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 DTNBP1Q96EV8 351 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 RABEP2Q9H5N1 569 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 NRBP1Q9UHY1 535 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 MRFAP1Q9Y605 127 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 SAMD9LQ8IVG5 1584 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 TRIM66O15016 1216 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CUTAO60888 179 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 EPHB4P54760 987 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ATP8B2P98198 1209 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 DRP2Q13474 957 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 TXLNGQ9NUQ3 528 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 MTMR7Q9Y216 660 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 NCOA3Q9Y6Q9 1424 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC197Q8NCU1 140 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CDC23Q9UJX2 597 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 TRIM75PA6NK02 468 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CASQ2O14958 399 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 PPFIA2O75334 1257 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 FERP16591 822 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 IQUBQ8NA54 791 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 KLHL14Q9P2G3 628 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 SCOCQ9UIL1 159 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 SGSM2O43147 1006 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CALCOCO2Q13137 446 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ADKP55263 362 aaKnown RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 MAP3K12Q12852 859 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CASP8Q14790 479 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ADALQ6DHV7 355 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 PHLDB3Q6NSJ2 640 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ZNF530Q6P9A1 599 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 CCDC25Q86WR0 208 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 PLA2G4DQ86XP0 818 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 RGS16O15492 202 aaPredicted RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 ZC3H6P61129 1189 aaKnown RBP7.85□□□□□ -1.15
SMC1A-201ENST00000322213 KRT71Q3SY84 523 aa7.85□□□□□ -1.15
SMC1A-201ENST00000322213 SPAG5Q96R06 1193 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms