RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 PDCL3Q9H2J4 239 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ATRNO75882 1429 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
ZNF543-201ENST00000321545 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
ZNF543-201ENST00000321545 PTMSP20962 102 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 FEZ1Q99689 392 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
ZNF543-201ENST00000321545 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
ZNF543-201ENST00000321545 AFDNP55196 1824 aaKnown RBP13.13□□□□□ -0.31
ZNF543-201ENST00000321545 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 TM4SF1P30408 202 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 APOA5Q6Q788 366 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 GDF11O95390 407 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
ZNF543-201ENST00000321545 PCDHAC2Q9Y5I4 1007 aa13.13□□□□□ -0.31
ZNF543-201ENST00000321545 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
ZNF543-201ENST00000321545 SP8Q8IXZ3 490 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 UBA5Q9GZZ9 404 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
ZNF543-201ENST00000321545 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 BIN1O00499 593 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
ZNF543-201ENST00000321545 TPM2P07951 284 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
ZNF543-201ENST00000321545 BRD1O95696 1058 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 PLCG2P16885 1265 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
ZNF543-201ENST00000321545 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 MBD3O95983 291 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 PLCD1P51178 756 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 TMEM87BQ96K49 555 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 MYO1BO43795 1136 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 DALRD3Q5D0E6 543 aaKnown RBP13.11□□□□□ -0.31
ZNF543-201ENST00000321545 ZSCAN10Q96SZ4 725 aaPredicted RBP13.11□□□□□ -0.31
ZNF543-201ENST00000321545 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 UTRNP46939 3433 aa13.11□□□□□ -0.31
ZNF543-201ENST00000321545 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 TTC6Q86TZ1 520 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 NSUN7Q8NE18 718 aaKnown RBP13.1□□□□□ -0.31
ZNF543-201ENST00000321545 GPKOWQ92917 476 aaPredicted RBP eCLIP13.1□□□□□ -0.31
ZNF543-201ENST00000321545 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
ZNF543-201ENST00000321545 SEMA3EO15041 775 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 CUL4AQ13619 759 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 ZNF771Q7L3S4 317 aaPredicted RBP13.1□□□□□ -0.31
ZNF543-201ENST00000321545 MYH14Q7Z406 1995 aaKnown RBP13.1□□□□□ -0.31
ZNF543-201ENST00000321545 BECN2A8MW95 431 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
ZNF543-201ENST00000321545 ANTXR2P58335 489 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 PNMA1Q8ND90 353 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 TDRD7Q8NHU6 1098 aaKnown RBP13.09□□□□□ -0.31
ZNF543-201ENST00000321545 CABP5Q9NP86 173 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 PFKFB2O60825 505 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 CDC27P30260 824 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 KRT40Q6A162 431 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.09□□□□□ -0.31
ZNF543-201ENST00000321545 FANCBQ8NB91 859 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 ARPP21Q9UBL0 812 aaPredicted RBP13.09□□□□□ -0.31
ZNF543-201ENST00000321545 AK9Q5TCS8 1911 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 CRKP46108 304 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
ZNF543-201ENST00000321545 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
ZNF543-201ENST00000321545 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 PES1O00541 588 aaKnown RBP13.08□□□□□ -0.32
ZNF543-201ENST00000321545 KIF5BP33176 963 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 NFIAQ12857 509 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
ZNF543-201ENST00000321545 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 TMTC2Q8N394 836 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 BTBD18B2RXH4 712 aa13.08□□□□□ -0.32
ZNF543-201ENST00000321545 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
ZNF543-201ENST00000321545 PLEKHA8P1O95397 391 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms