RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 ECHDC1Q9NTX5 307 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 GINM1Q9NU53 330 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 PPP2R3BQ9Y5P8 575 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 PITPNM2Q9BZ72 1349 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 WNT7AO00755 349 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 DXOO77932 396 aaKnown RBP4□□□□□ -1.77
SCAMP1-201ENST00000320280 SASH1O94885 1247 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 LDHCP07864 332 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 RPIAP49247 311 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 WDR4P57081 412 aaKnown RBP4□□□□□ -1.77
SCAMP1-201ENST00000320280 SH3BP2P78314 561 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 HAUS7Q99871 368 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 DDX24Q9GZR7 859 aaKnown RBP eCLIP4□□□□□ -1.77
SCAMP1-201ENST00000320280 GPBP1L1Q9HC44 474 aaPredicted RBP4□□□□□ -1.77
SCAMP1-201ENST00000320280 MYH8P13535 1937 aa4□□□□□ -1.77
SCAMP1-201ENST00000320280 SCN9AQ15858 1988 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 PCP11498 1178 aaKnown RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 JUNDP17535 347 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 HIBADHP31937 336 aaKnown RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 KCNJ4P48050 445 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 USP46P62068 366 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 MSS51Q4VC12 460 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 GIMAP6Q6P9H5 292 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 CELF1Q92879 486 aaKnown RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 EVI5LQ96CN4 794 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 HOOK2Q96ED9 719 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 PURBQ96QR8 312 aaKnown RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 FZD9O00144 591 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 GNAT2P19087 354 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 MX1P20591 662 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 MSL1Q68DK7 614 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 CASC1Q6TDU7 716 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 NIM1KQ8IY84 436 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 CNTROBQ8N137 903 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 ZNF622Q969S3 477 aaKnown RBP eCLIP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 ZFP42Q96MM3 310 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 FHDC1Q9C0D6 1143 aaPredicted RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 ZC3H12CQ9C0D7 883 aaKnown RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 ZNRF3Q9ULT6 936 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 TNNQ9UQP3 1299 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 CHMP3Q9Y3E7 222 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 MYH1P12882 1939 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 GREB1LQ9C091 1923 aaPredicted RBP3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 A0A1B0GUL7 405 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 GPSM2P81274 684 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 UBE3CQ15386 1083 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 HHIPL2Q6UWX4 724 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 RUFY2Q8WXA3 655 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 FOXJ1Q92949 421 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 IL17RAQ96F46 866 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 HDAC9Q9UKV0 1011 aa3.99□□□□□ -1.77
SCAMP1-201ENST00000320280 FIGNL2A6NMB9 653 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 UFL1O94874 794 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 VIL1P09327 827 aaKnown RBP3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 EIF6P56537 245 aaKnown RBP3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 WASHC4Q2M389 1173 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 TTC39AQ5SRH9 613 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 GPC2Q8N158 579 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 SYNE4Q8N205 404 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 XAGE2Q96GT9 111 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 ZFAND3Q9H8U3 227 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 SERPINA10Q9UK55 444 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 GAKO14976 1311 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 THSD7BQ9C0I4 1608 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 USP17L3A6NCW0 530 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 USP17L4A6NCW7 530 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 MMP16P51512 607 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 ZNF280AP59817 542 aaPredicted RBP3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 TFCP2Q12800 502 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 USP17L1Q7RTZ2 530 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 JDP2Q8WYK2 163 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 MTA3Q9BTC8 594 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 SEC31BQ9NQW1 1179 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 ANKIB1Q9P2G1 1089 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 MYO5AQ9Y4I1 1855 aaKnown RBP3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 DOCK1Q14185 1865 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 IQCA1LA6NCM1 817 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 CFAP99D6REC4 459 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 MAN1A2O60476 641 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 PDE1AP54750 535 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 TTC22Q5TAA0 569 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 AACSQ86V21 672 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 FAM84BQ96KN1 310 aaPredicted RBP3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 CD209Q9NNX6 404 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 SYNPO2Q9UMS6 1093 aa3.98□□□□□ -1.77
SCAMP1-201ENST00000320280 MAP3K12Q12852 859 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 NNTQ13423 1086 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 LRRC24Q50LG9 513 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 CCDC102BQ68D86 513 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 KBTBD3Q8NAB2 608 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 PI4K2BQ8TCG2 481 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 LIMD1Q9UGP4 676 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 ATAD5Q96QE3 1844 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 ROBO3Q96MS0 1386 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 NFKBIEO00221 500 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 GORABQ5T7V8 394 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 RSBN1LQ6PCB5 846 aaPredicted RBP3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 VPS37DQ86XT2 251 aa3.97□□□□□ -1.77
SCAMP1-201ENST00000320280 PLEKHM2Q8IWE5 1019 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms