RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC183Q5T5S1 534 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CHST3Q7LGC8 479 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 DGKHQ86XP1 1220 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CERS5Q8N5B7 392 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-201ENST00000316534 INCENPQ9NQS7 918 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 GOLGA6L3A6NEY3 463 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 ZBTB43O43298 467 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 KDM4AO75164 1064 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 YEATS4O95619 227 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 MMP10P09238 476 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CALM1P0DP23 149 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CALM2P0DP24 149 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CALM3P0DP25 149 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 PKN1Q16512 942 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
NPHP1-201ENST00000316534 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
NPHP1-201ENST00000316534 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 PRPF3O43395 683 aaKnown RBP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 PLCG2P16885 1265 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 METAP2P50579 478 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 NPY5RQ15761 445 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 SH3RF3Q8TEJ3 882 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 EHD4Q9H223 541 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 IL17RBQ9NRM6 502 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 TDO2P48775 406 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 STK3Q13188 491 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 PTPAQ15257 358 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 TMEM67Q5HYA8 995 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 VPS37DQ86XT2 251 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 ANKIB1Q9P2G1 1089 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 CFAP45Q9UL16 551 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 TNKSO95271 1327 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 FLT1P17948 1338 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 KIF28PB7ZC32 967 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 M0R2N6 131 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 EZH2Q15910 746 aaKnown RBP8.38□□□□□ -1.07
NPHP1-201ENST00000316534 PODNQ7Z5L7 613 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC125Q86Z20 511 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 SLF2Q8IX21 1173 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 CNTNAP5Q8WYK1 1306 aa8.38□□□□□ -1.07
NPHP1-201ENST00000316534 FANCBQ8NB91 859 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 PSMD1Q99460 953 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 FOXP1Q9H334 677 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-201ENST00000316534 PHIPQ8WWQ0 1821 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 PPP6R2O75170 966 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
NPHP1-201ENST00000316534 EVX2Q03828 476 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 WTAPQ15007 396 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 LINC00301Q8NCQ3 95 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 PHF20Q9BVI0 1012 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 AATFQ9NY61 560 aaKnown RBP eCLIP8.37□□□□□ -1.07
NPHP1-201ENST00000316534 ABCF2Q9UG63 623 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-201ENST00000316534 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 USP17L21D6R901 530 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 BAG3O95817 575 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 MMP1P03956 469 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 SNHG28P0DPA3 235 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 DACT2Q5SW24 774 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 TMTC3Q6ZXV5 915 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 SYAP1Q96A49 352 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-201ENST00000316534 ZDHHC15Q96MV8 337 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
NPHP1-201ENST00000316534 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 GRM4Q14833 912 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 AXDND1Q5T1B0 1012 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 STRIP1Q5VSL9 837 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 CAVIN1Q6NZI2 390 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 MPNDQ8N594 471 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 WASF1Q92558 559 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 IDI2Q9BXS1 227 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 SH3GLB2Q9NR46 395 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 IFIT3O14879 490 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 DEXIO95424 95 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 RASA1P20936 1047 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 SART3Q15020 963 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 DAGLBQ8NCG7 672 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 EYA3Q99504 573 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 CLSTN2Q9H4D0 955 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 RBM27Q9P2N5 1060 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 MMP14P50281 582 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 KIAA2012Q0VF49 1180 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 ADALQ6DHV7 355 aa8.36□□□□□ -1.07
NPHP1-201ENST00000316534 APOBEC3HQ6NTF7 200 aaKnown RBP8.36□□□□□ -1.07
NPHP1-201ENST00000316534 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms