RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 C8orf34Q49A92 452 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 UBE2Q2Q8WVN8 375 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 USH1GQ495M9 461 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 NELFCDQ8IXH7 590 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 ELP1O95163 1332 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 KRT19P08727 400 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 TSPYL6Q8N831 410 aa23.35■■□□□ 1.33
KDM3B-201ENST00000314358 GBP1P32455 592 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 VSIG1Q86XK7 387 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 LRMPQ12912 555 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 FAM184BQ9ULE4 1060 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 TRAF1Q13077 416 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 CUL4BQ13620 913 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 VCX3BQ9H321 246 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 POLD1P28340 1107 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 ATP5DP30049 168 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 TAB2Q9NYJ8 693 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 NUP153P49790 1475 aaKnown RBP23.34■■□□□ 1.33
KDM3B-201ENST00000314358 PRDM1O75626 825 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 ANKRD42Q8N9B4 389 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
KDM3B-201ENST00000314358 A0A1B0GUL7 405 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 HHATQ5VTY9 493 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 IFT74Q96LB3 600 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 SH2D4BQ5SQS7 431 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 INPP5BP32019 993 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 CPSF2Q9P2I0 782 aaKnown RBP23.33■■□□□ 1.33
KDM3B-201ENST00000314358 NDUFB9Q9Y6M9 179 aa23.33■■□□□ 1.33
KDM3B-201ENST00000314358 VGLL3A8MV65 326 aa23.33■■□□□ 1.32
KDM3B-201ENST00000314358 CSGALNACT2Q8N6G5 542 aa23.33■■□□□ 1.32
KDM3B-201ENST00000314358 SYNRGQ9UMZ2 1314 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 NACA2Q9H009 215 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 NOD1Q9Y239 953 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 CTTNBP2NLQ9P2B4 639 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 RDH13Q8NBN7 331 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 DDX27Q96GQ7 796 aaKnown RBP23.32■■□□□ 1.32
KDM3B-201ENST00000314358 GIPC1O14908 333 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 TBC1D8O95759 1140 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 CYP26C1Q6V0L0 522 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 LMNTD2Q8IXW0 634 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 ANO3Q9BYT9 981 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 GNAT2P19087 354 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 BRAPQ7Z569 592 aa23.32■■□□□ 1.32
KDM3B-201ENST00000314358 CEP85Q6P2H3 762 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 CAPN12Q6ZSI9 719 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 CCDC24Q8N4L8 307 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 RILPQ96NA2 401 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 BLZF1Q9H2G9 400 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 CCDC62Q6P9F0 684 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 HINFPQ9BQA5 517 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 TIMM10P62072 90 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 ERCC6LQ2NKX8 1250 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 TAB3Q8N5C8 712 aaPredicted RBP23.31■■□□□ 1.32
KDM3B-201ENST00000314358 RTCBQ9Y3I0 505 aaKnown RBP23.31■■□□□ 1.32
KDM3B-201ENST00000314358 KLHDC4Q8TBB5 520 aa23.31■■□□□ 1.32
KDM3B-201ENST00000314358 V9GY48 417 aaPredicted RBP23.31■■□□□ 1.32
KDM3B-201ENST00000314358 KRT15P19012 456 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 STRN3Q13033 797 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 GSDMBQ8TAX9 411 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 CSRNP2Q9H175 543 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 ARHGAP44Q17R89 818 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 TEX11Q8IYF3 940 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 DACT3Q96B18 629 aaPredicted RBP23.3■■□□□ 1.32
KDM3B-201ENST00000314358 FANCCQ00597 558 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
KDM3B-201ENST00000314358 UBL4BQ8N7F7 174 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 ACTN4O43707 911 aaKnown RBP23.3■■□□□ 1.32
KDM3B-201ENST00000314358 CTDSPL2Q05D32 466 aa23.3■■□□□ 1.32
KDM3B-201ENST00000314358 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
KDM3B-201ENST00000314358 SLC8A3P57103 927 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 SECISBP2LQ93073 1101 aaKnown RBP23.29■■□□□ 1.32
KDM3B-201ENST00000314358 LIN9Q5TKA1 542 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 B4GALNT4Q76KP1 1039 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 LMTK3Q96Q04 1460 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 PHKBQ93100 1093 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 IL2RBP14784 551 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 CHMLP26374 656 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 GUCY2FP51841 1108 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 RBM28Q9NW13 759 aaKnown RBP23.29■■□□□ 1.32
KDM3B-201ENST00000314358 DCUN1D2Q6PH85 259 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 KCNH3Q9ULD8 1083 aa23.29■■□□□ 1.32
KDM3B-201ENST00000314358 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 CALUO43852 315 aaPredicted RBP23.28■■□□□ 1.32
KDM3B-201ENST00000314358 RLBP1P12271 317 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 CCDC105Q8IYK2 499 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 SWAP70Q9UH65 585 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 B4DLN1 442 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 MRPL12P52815 198 aaKnown RBP23.28■■□□□ 1.32
KDM3B-201ENST00000314358 BIRC2Q13490 618 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 VPS37BQ9H9H4 285 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 SMTNP53814 917 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 SNX21Q969T3 373 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 TRIM68Q6AZZ1 485 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 JDP2Q8WYK2 163 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 PPME1Q9Y570 386 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 GNPATO15228 680 aa23.28■■□□□ 1.32
KDM3B-201ENST00000314358 MTX1Q13505 466 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms