RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
DDX54-202ENST00000314045 FAM160A1Q05DH4 1040 aa15.58■□□□□ 0.09
DDX54-202ENST00000314045 RMND1Q9NWS8 449 aa15.58■□□□□ 0.09
DDX54-202ENST00000314045 VPS54Q9P1Q0 977 aa15.58■□□□□ 0.09
DDX54-202ENST00000314045 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 C3P01024 1663 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
DDX54-202ENST00000314045 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 MTIF2P46199 727 aaKnown RBP15.58■□□□□ 0.08
DDX54-202ENST00000314045 CHMP4BP1P59074 171 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 GOLGA6L1Q8N7Z2 621 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 STRBPQ96SI9 672 aaKnown RBP15.58■□□□□ 0.08
DDX54-202ENST00000314045 LZTS2Q9BRK4 669 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 EXOC1Q9NV70 894 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 MED23Q9ULK4 1368 aa15.58■□□□□ 0.08
DDX54-202ENST00000314045 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
DDX54-202ENST00000314045 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.08
DDX54-202ENST00000314045 TICAM2Q86XR7 235 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 CPLX3Q8WVH0 158 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 ZFYVE27Q5T4F4 411 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 ARID4AP29374 1257 aaPredicted RBP15.57■□□□□ 0.08
DDX54-202ENST00000314045 ASIC1P78348 528 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 SCRN1Q12765 414 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 PLS1Q14651 629 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 JAKMIP3Q5VZ66 844 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 MASTLQ96GX5 879 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 LMBRD1Q9NUN5 540 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
DDX54-202ENST00000314045 KIF20BQ96Q89 1820 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 MECOMQ03112 1051 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 CAGE1Q8TC20 777 aa15.57■□□□□ 0.08
DDX54-202ENST00000314045 CUL4AQ13619 759 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 HSP90AA4PQ58FG1 418 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 ODF2Q5BJF6 829 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 APOA5Q6Q788 366 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 H7C1D1 291 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 GADD45BO75293 160 aaPredicted RBP15.56■□□□□ 0.08
DDX54-202ENST00000314045 TMC6Q7Z403 805 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 FCHSD1Q86WN1 690 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 TRIM47Q96LD4 638 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 CSF1RP07333 972 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 AOPEPQ8N6M6 819 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 ZNF397Q8NF99 534 aaPredicted RBP15.56■□□□□ 0.08
DDX54-202ENST00000314045 PICK1Q9NRD5 415 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 ZMYM6O95789 1325 aa15.56■□□□□ 0.08
DDX54-202ENST00000314045 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
DDX54-202ENST00000314045 SCARF1Q14162 830 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 TTC38Q5R3I4 469 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 CC2D2BQ6DHV5 1058 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 PLIN2Q99541 437 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 PRDX5P30044 214 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 PXDNQ92626 1479 aa15.55■□□□□ 0.08
DDX54-202ENST00000314045 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 CCDC40Q4G0X9 1142 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 PPP4R3AQ6IN85 833 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 CACNA2D4Q7Z3S7 1137 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 ELP1O95163 1332 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 CYP2D7A0A087X1C5 515 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 N4BP3O15049 544 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 ARHGAP29Q52LW3 1261 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 COA1Q9GZY4 146 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
DDX54-202ENST00000314045 KCNH3Q9ULD8 1083 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 UTYO14607 1347 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 PXDNLA1KZ92 1463 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
DDX54-202ENST00000314045 FBXO18Q8NFZ0 1043 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 ZSWIM5Q9P217 1185 aa15.54■□□□□ 0.08
DDX54-202ENST00000314045 KLRF2D3W0D1 207 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 NONOQ15233 471 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX54-202ENST00000314045 CERKLQ49MI3 558 aaPredicted RBP15.53■□□□□ 0.08
DDX54-202ENST00000314045 TCERG1LQ5VWI1 586 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 TTLL6Q8N841 843 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 CCDC112Q8NEF3 446 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 CHAMP1Q96JM3 812 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 PSMA7O14818 248 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 USP17L8P0C7I0 530 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 UBASH3AP57075 661 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 PRKG1Q13976 671 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.53■□□□□ 0.08
DDX54-202ENST00000314045 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 CUTAO60888 179 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 EN1Q05925 392 aaPredicted RBP15.53■□□□□ 0.08
DDX54-202ENST00000314045 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 STXBP4Q6ZWJ1 553 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 USP28Q96RU2 1077 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
DDX54-202ENST00000314045 RAD17O75943 681 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 YEATS4O95619 227 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 GSDMDP57764 484 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 SPECC1Q5M775 1068 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 ARHGAP27Q6ZUM4 889 aa15.52■□□□□ 0.08
DDX54-202ENST00000314045 LRRC47Q8N1G4 583 aaKnown RBP15.52■□□□□ 0.08
DDX54-202ENST00000314045 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.08
DDX54-202ENST00000314045 SEPT11Q9NVA2 429 aaKnown RBP15.52■□□□□ 0.08
DDX54-202ENST00000314045 ARGLU1Q9NWB6 273 aaPredicted RBP15.52■□□□□ 0.08
DDX54-202ENST00000314045 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms