RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 TEPSINQ96N21 525 aa22.2■■□□□ 1.15
CDK4-202ENST00000312990 DEFB129Q9H1M3 183 aa22.2■■□□□ 1.15
CDK4-202ENST00000312990 NMRK2Q9NPI5 230 aa22.2■■□□□ 1.15
CDK4-202ENST00000312990 ATAD5Q96QE3 1844 aa22.2■■□□□ 1.14
CDK4-202ENST00000312990 FGRP09769 529 aa22.2■■□□□ 1.14
CDK4-202ENST00000312990 VEGFAP15692 232 aaPredicted RBP22.2■■□□□ 1.14
CDK4-202ENST00000312990 GABPAQ06546 454 aa22.2■■□□□ 1.14
CDK4-202ENST00000312990 PNMA8AQ86V59 439 aaPredicted RBP22.2■■□□□ 1.14
CDK4-202ENST00000312990 ZNF526Q8TF50 670 aaPredicted RBP22.2■■□□□ 1.14
CDK4-202ENST00000312990 GREB1LQ9C091 1923 aaPredicted RBP22.19■■□□□ 1.14
CDK4-202ENST00000312990 HLA-DOAP06340 250 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 SLURP2P0DP57 97 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 KRT32Q14532 448 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 EAPPQ56P03 285 aaPredicted RBP22.19■■□□□ 1.14
CDK4-202ENST00000312990 SLC44A5Q8NCS7 719 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 ZC3H15Q8WU90 426 aaKnown RBP22.19■■□□□ 1.14
CDK4-202ENST00000312990 JAKMIP1Q96N16 626 aaKnown RBP22.19■■□□□ 1.14
CDK4-202ENST00000312990 CSRNP1Q96S65 589 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 EHD4Q9H223 541 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 PI4KBQ9UBF8 816 aa22.19■■□□□ 1.14
CDK4-202ENST00000312990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDK4-202ENST00000312990 POTEIP0CG38 1075 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 POTEJP0CG39 1038 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 MFSD6Q6ZSS7 791 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 C16orf86Q6ZW13 317 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 DNAJC18Q9H819 358 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 SERPINB13Q9UIV8 391 aa22.18■■□□□ 1.14
CDK4-202ENST00000312990 TM6SF1Q9BZW5 370 aa22.17■■□□□ 1.14
CDK4-202ENST00000312990 PRDM1O75626 825 aa22.17■■□□□ 1.14
CDK4-202ENST00000312990 SLC3A2P08195 630 aaKnown RBP22.17■■□□□ 1.14
CDK4-202ENST00000312990 CPA1P15085 419 aa22.17■■□□□ 1.14
CDK4-202ENST00000312990 CASTP20810 708 aaKnown RBP22.17■■□□□ 1.14
CDK4-202ENST00000312990 METTL16Q86W50 562 aaKnown RBP22.17■■□□□ 1.14
CDK4-202ENST00000312990 DCPSQ96C86 337 aaKnown RBP22.17■■□□□ 1.14
CDK4-202ENST00000312990 NEK1Q96PY6 1258 aa22.17■■□□□ 1.14
CDK4-202ENST00000312990 RNF41Q9H4P4 317 aaPredicted RBP22.17■■□□□ 1.14
CDK4-202ENST00000312990 ORC4O43929 436 aa22.16■■□□□ 1.14
CDK4-202ENST00000312990 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
CDK4-202ENST00000312990 CDK8P49336 464 aa22.16■■□□□ 1.14
CDK4-202ENST00000312990 PDE4BQ07343 736 aa22.16■■□□□ 1.14
CDK4-202ENST00000312990 MB21D2Q8IYB1 491 aaPredicted RBP22.16■■□□□ 1.14
CDK4-202ENST00000312990 NCOA7Q8NI08 942 aa22.16■■□□□ 1.14
CDK4-202ENST00000312990 UPF3BQ9BZI7 483 aaKnown RBP22.16■■□□□ 1.14
CDK4-202ENST00000312990 FAM196BA6NMK8 535 aa22.15■■□□□ 1.14
CDK4-202ENST00000312990 B4E1Z4 1266 aa22.15■■□□□ 1.14
CDK4-202ENST00000312990 ZSWIM6Q9HCJ5 1215 aa22.15■■□□□ 1.14
CDK4-202ENST00000312990 PPP2R3BQ9Y5P8 575 aa22.15■■□□□ 1.14
CDK4-202ENST00000312990 SSC5DA1L4H1 1573 aa22.15■■□□□ 1.14
CDK4-202ENST00000312990 ADM5C9JUS6 153 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 PSMA5P28066 241 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 SHMT1P34896 483 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 PRAMEF18Q5VWM3 479 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 CNNM2Q9H8M5 875 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 MYH4Q9Y623 1939 aa22.14■■□□□ 1.14
CDK4-202ENST00000312990 OTOFQ9HC10 1997 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 TRDNQ13061 729 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 RABEP1Q15276 862 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 RRP12Q5JTH9 1297 aaKnown RBP22.14■■□□□ 1.13
CDK4-202ENST00000312990 NBPF12Q5TAG4 269 aaPredicted RBP22.14■■□□□ 1.13
CDK4-202ENST00000312990 DLK2Q6UY11 383 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 KRT26Q7Z3Y9 468 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 RALYLQ86SE5 291 aaKnown RBP22.14■■□□□ 1.13
CDK4-202ENST00000312990 FOXP4Q8IVH2 680 aaPredicted RBP22.14■■□□□ 1.13
CDK4-202ENST00000312990 SULF1Q8IWU6 871 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 KRT23Q9C075 422 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 TOMM22Q9NS69 142 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 SWAP70Q9UH65 585 aa22.14■■□□□ 1.13
CDK4-202ENST00000312990 PAPPA2Q9BXP8 1791 aa22.13■■□□□ 1.13
CDK4-202ENST00000312990 KDM4AO75164 1064 aa22.13■■□□□ 1.13
CDK4-202ENST00000312990 RASA1P20936 1047 aa22.13■■□□□ 1.13
CDK4-202ENST00000312990 BLOC1S2Q6QNY1 142 aa22.13■■□□□ 1.13
CDK4-202ENST00000312990 RUFY3Q7L099 469 aa22.13■■□□□ 1.13
CDK4-202ENST00000312990 CRACR2BQ8N4Y2 399 aaPredicted RBP22.13■■□□□ 1.13
CDK4-202ENST00000312990 HERC5Q9UII4 1024 aaKnown RBP22.13■■□□□ 1.13
CDK4-202ENST00000312990 RPS6KB1P23443 525 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 ANTXR2P58335 489 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 CYB5R4Q7L1T6 521 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 MKNK2Q9HBH9 465 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 TAOK2Q9UL54 1235 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 DOCK1Q14185 1865 aa22.12■■□□□ 1.13
CDK4-202ENST00000312990 TBC1D12O60347 775 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 HMGB1P09429 215 aaKnown RBP22.11■■□□□ 1.13
CDK4-202ENST00000312990 MAP3K10Q02779 954 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 MIGA2Q7L4E1 593 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 CHST3Q7LGC8 479 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 ZNF287Q9HBT7 754 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 ZSWIM5Q9P217 1185 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 CYP46A1Q9Y6A2 500 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 TRPM7Q96QT4 1865 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 RANBP6O60518 1105 aaKnown RBP22.11■■□□□ 1.13
CDK4-202ENST00000312990 NEK4P51957 841 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 EXOSC10Q01780 885 aaKnown RBP22.11■■□□□ 1.13
CDK4-202ENST00000312990 TATDN1Q6P1N9 297 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 DHX32Q7L7V1 743 aaKnown RBP22.11■■□□□ 1.13
CDK4-202ENST00000312990 LDHDQ86WU2 507 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 ESR2Q92731 530 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 TTC14Q96N46 770 aa22.11■■□□□ 1.13
CDK4-202ENST00000312990 GLIS2Q9BZE0 524 aaPredicted RBP22.11■■□□□ 1.13
CDK4-202ENST00000312990 CLEC11AQ9Y240 323 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms