RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 NECTIN1Q15223 517 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 SUPT20HL1Q3ZLR7 823 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 FOXP4Q8IVH2 680 aaPredicted RBP15.07■□□□□ 0
CHMP2A-201ENST00000312547 ZSCAN29Q8IWY8 852 aaPredicted RBP15.07■□□□□ 0
CHMP2A-201ENST00000312547 SMC1BQ8NDV3 1235 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 BACH2Q9BYV9 841 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 NBPF3Q9H094 633 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 DNAJC18Q9H819 358 aa15.07■□□□□ 0
CHMP2A-201ENST00000312547 NAV1Q8NEY1 1877 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 MINDY4BA8MYZ0 360 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 FGRP09769 529 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 SLURP2P0DP57 97 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 0
CHMP2A-201ENST00000312547 SLC4A8Q2Y0W8 1093 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 AMOTL1Q8IY63 956 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 KCNB2Q92953 911 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 HOOK2Q96ED9 719 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 HERC5Q9UII4 1024 aaKnown RBP15.06■□□□□ 0
CHMP2A-201ENST00000312547 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
CHMP2A-201ENST00000312547 CYP21A2P08686 494 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 HSPA4P34932 840 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 IMMTQ16891 758 aaKnown RBP15.05■□□□□ -0
CHMP2A-201ENST00000312547 C16orf86Q6ZW13 317 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 DYNLL2Q96FJ2 89 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 PASKQ96RG2 1323 aa15.05■□□□□ -0
CHMP2A-201ENST00000312547 SIPA1L1O43166 1804 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 ZNF213O14771 459 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 SLC27A2O14975 620 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 SHMT1P34896 483 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 HAND2P61296 217 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 CTDSPL2Q05D32 466 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 FSTL1Q12841 308 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 CREB3L3Q68CJ9 461 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 TBC1D10CQ8IV04 446 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 SLC44A5Q8NCS7 719 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 SWAP70Q9UH65 585 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 ZNF112Q9UJU3 913 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP2A-201ENST00000312547 TAF6LQ9Y6J9 622 aa15.04■□□□□ -0
CHMP2A-201ENST00000312547 FAM196BA6NMK8 535 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 CDK8P49336 464 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 DCAF15Q66K64 600 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 MIGA2Q7L4E1 593 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 CRACR2BQ8N4Y2 399 aaPredicted RBP15.03■□□□□ -0
CHMP2A-201ENST00000312547 STAG1Q8WVM7 1258 aa15.03■□□□□ -0
CHMP2A-201ENST00000312547 POLR2AP24928 1970 aaKnown RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 MYH1P12882 1939 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 BAZ2AQ9UIF9 1905 aaKnown RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 ORC4O43929 436 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 USP2O75604 605 aaPredicted RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 SLC3A2P08195 630 aaKnown RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 PCP11498 1178 aaKnown RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 NF2P35240 595 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 RRP1BQ14684 758 aaKnown RBP15.02■□□□□ -0
CHMP2A-201ENST00000312547 MAP3K11Q16584 847 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 TSGA10IPQ3SY00 556 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 AKNAD1Q5T1N1 836 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 CST9Q5W186 159 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 RASEFQ8IZ41 740 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 KLRG1Q96E93 195 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 ZNF341Q9BYN7 854 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.02■□□□□ -0
CHMP2A-201ENST00000312547 INCENPQ9NQS7 918 aa15.02■□□□□ -0
CHMP2A-201ENST00000312547 FKBP1BP68106 108 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 PDE4BQ07343 736 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 RNF20Q5VTR2 975 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 STOX1Q6ZVD7 989 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 IL17RAQ96F46 866 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 RNF41Q9H4P4 317 aaPredicted RBP15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 FZD1Q9UP38 647 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 LAMB1P07942 1786 aa15.01□□□□□ -0.01
CHMP2A-201ENST00000312547 NEDD4P46934 1319 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 PPP1R12BO60237 982 aaPredicted RBP15□□□□□ -0.01
CHMP2A-201ENST00000312547 CELF2O95319 508 aaKnown RBP15□□□□□ -0.01
CHMP2A-201ENST00000312547 RASA1P20936 1047 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 MFSD6Q6ZSS7 791 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 STK11IPQ8N1F8 1099 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 TRIM34Q9BYJ4 488 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 ZNF287Q9HBT7 754 aa15□□□□□ -0.01
CHMP2A-201ENST00000312547 GBA2Q9HCG7 927 aaPredicted RBP15□□□□□ -0.01
CHMP2A-201ENST00000312547 LAMA4Q16363 1823 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 E7EWF7 191 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 PRDM1O75626 825 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 MCCP23508 829 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 INPP5BP32019 993 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 NT5C2P49902 561 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 JAG1P78504 1218 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 LDLRAD1Q5T700 205 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 MOB2Q70IA6 237 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 CCDC17Q96LX7 622 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 ZNF408Q9H9D4 720 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 ANGEL1Q9UNK9 670 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 SNX14Q9Y5W7 946 aa14.99□□□□□ -0.01
CHMP2A-201ENST00000312547 UNCXA6NJT0 531 aa14.98□□□□□ -0.01
CHMP2A-201ENST00000312547 CTNND1O60716 968 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms