RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 POLR3DP05423 398 aaPredicted RBP19.54■□□□□ 0.72
CLCF1-201ENST00000312438 CDC27P30260 824 aa19.54■□□□□ 0.72
CLCF1-201ENST00000312438 KIAA2012Q0VF49 1180 aa19.54■□□□□ 0.72
CLCF1-201ENST00000312438 MAPKAPK5Q8IW41 473 aa19.54■□□□□ 0.72
CLCF1-201ENST00000312438 MRIQ9BWK5 157 aa19.54■□□□□ 0.72
CLCF1-201ENST00000312438 CCDC196A0A1B0GTZ2 297 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 F8W031 263 aaPredicted RBP19.53■□□□□ 0.72
CLCF1-201ENST00000312438 MBD3O95983 291 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 RXRAP19793 462 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 KRT85P78386 507 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 HHIPL2Q6UWX4 724 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 RTKN2Q8IZC4 609 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 MYL10Q9BUA6 226 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 GDPD2Q9HCC8 539 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 FAM217BQ9NTX9 383 aaPredicted RBP19.53■□□□□ 0.72
CLCF1-201ENST00000312438 ECE2O60344 883 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 PPFIA3O75145 1194 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 DPEP1P16444 411 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 KCNA3P22001 575 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 EVX2Q03828 476 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 ENAHQ8N8S7 591 aaPredicted RBP19.53■□□□□ 0.72
CLCF1-201ENST00000312438 MXD3Q9BW11 206 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 ZNF287Q9HBT7 754 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 NID2Q14112 1375 aa19.53■□□□□ 0.72
CLCF1-201ENST00000312438 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 RESTQ13127 1097 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 NTRK3Q16288 839 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 IFIT1BQ5T764 474 aaKnown RBP19.52■□□□□ 0.72
CLCF1-201ENST00000312438 CCDC144CPQ8IYA2 1237 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 ZNF654Q8IZM8 581 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 FANCBQ8NB91 859 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 GPT2Q8TD30 523 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 KCNQ5Q9NR82 932 aa19.52■□□□□ 0.72
CLCF1-201ENST00000312438 USP17L3A6NCW0 530 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 USP17L4A6NCW7 530 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 TSPY2A6NKD2 308 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 IARSP41252 1262 aaKnown RBP19.51■□□□□ 0.71
CLCF1-201ENST00000312438 TGFB2P61812 414 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 AOC3Q16853 763 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 USP17L1Q7RTZ2 530 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 TEKT1Q969V4 418 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 MKNK2Q9HBH9 465 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 ROBO3Q96MS0 1386 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 FLT1P17948 1338 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 POLD1P28340 1107 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 PLCD1P51178 756 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 RTN1Q16799 776 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 DACT2Q5SW24 774 aa19.51■□□□□ 0.71
CLCF1-201ENST00000312438 FIBPO43427 364 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 ZBTB7AO95365 584 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 IFNAR1P17181 557 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 CCDC178Q5BJE1 867 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 FAM47AQ5JRC9 791 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 CATIPQ7Z7H3 387 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
CLCF1-201ENST00000312438 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 PSMD1Q99460 953 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 SCAND2PQ9GZW5 306 aaPredicted RBP19.5■□□□□ 0.71
CLCF1-201ENST00000312438 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
CLCF1-201ENST00000312438 SAP30BPQ9UHR5 308 aaKnown RBP19.5■□□□□ 0.71
CLCF1-201ENST00000312438 PPIP5K2O43314 1243 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 CALM1P0DP23 149 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 CALM2P0DP24 149 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 CALM3P0DP25 149 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 SCNN1DP51172 638 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 HDLBPQ00341 1268 aaKnown RBP19.49■□□□□ 0.71
CLCF1-201ENST00000312438 TFAP4Q01664 338 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
CLCF1-201ENST00000312438 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 USP40Q9NVE5 1235 aa19.49■□□□□ 0.71
CLCF1-201ENST00000312438 FOSBP53539 338 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 UBE2HP62256 183 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 FAM173BQ6P4H8 233 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 GADD45BO75293 160 aaPredicted RBP19.48■□□□□ 0.71
CLCF1-201ENST00000312438 FMNL1O95466 1100 aaPredicted RBP19.48■□□□□ 0.71
CLCF1-201ENST00000312438 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 ATL3Q6DD88 541 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 APOBEC3HQ6NTF7 200 aaKnown RBP19.48■□□□□ 0.71
CLCF1-201ENST00000312438 CAVIN1Q6NZI2 390 aaKnown RBP19.48■□□□□ 0.71
CLCF1-201ENST00000312438 DGKHQ86XP1 1220 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 WASF1Q92558 559 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 PHKBQ93100 1093 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 ZDHHC15Q96MV8 337 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 ALG1Q9BT22 464 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 VPS33BQ9H267 617 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 TCP11L1Q9NUJ3 509 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
CLCF1-201ENST00000312438 ATF5Q9Y2D1 282 aaPredicted RBP19.48■□□□□ 0.71
CLCF1-201ENST00000312438 CRKP46108 304 aa19.47■□□□□ 0.71
CLCF1-201ENST00000312438 GUCY1B3Q02153 619 aa19.47■□□□□ 0.71
CLCF1-201ENST00000312438 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
CLCF1-201ENST00000312438 TTC6Q86TZ1 520 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms