RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 IKBKBO14920 756 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 ZSCAN20P17040 1043 aaPredicted RBP29.15■■■□□ 2.26
HOXB3-201ENST00000311626 IFNAR1P17181 557 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 ELF2Q15723 593 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 INTS5Q6P9B9 1019 aaKnown RBP29.15■■■□□ 2.26
HOXB3-201ENST00000311626 CYP2D7A0A087X1C5 515 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 FAM205CA6NFA0 338 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 POLR2DO15514 142 aaKnown RBP29.15■■■□□ 2.26
HOXB3-201ENST00000311626 KRT23Q9C075 422 aa29.15■■■□□ 2.26
HOXB3-201ENST00000311626 SERTAD1Q9UHV2 236 aa29.14■■■□□ 2.26
HOXB3-201ENST00000311626 CYP7A1P22680 504 aa29.14■■■□□ 2.26
HOXB3-201ENST00000311626 EIF5P55010 431 aaKnown RBP29.14■■■□□ 2.26
HOXB3-201ENST00000311626 OLFM4Q6UX06 510 aa29.14■■■□□ 2.26
HOXB3-201ENST00000311626 TRMT44Q8IYL2 757 aaKnown RBP29.14■■■□□ 2.26
HOXB3-201ENST00000311626 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.14■■■□□ 2.26
HOXB3-201ENST00000311626 ATP6V1AP38606 617 aa29.13■■■□□ 2.25
HOXB3-201ENST00000311626 CRKLP46109 303 aaKnown RBP29.13■■■□□ 2.25
HOXB3-201ENST00000311626 CNNM2Q9H8M5 875 aa29.13■■■□□ 2.25
HOXB3-201ENST00000311626 PRDM4Q9UKN5 801 aa29.13■■■□□ 2.25
HOXB3-201ENST00000311626 CHRNDQ07001 517 aa29.13■■■□□ 2.25
HOXB3-201ENST00000311626 SAFBQ15424 915 aaKnown RBP eCLIP29.13■■■□□ 2.25
HOXB3-201ENST00000311626 NACAP1Q9BZK3 213 aa29.13■■■□□ 2.25
HOXB3-201ENST00000311626 NIP7Q9Y221 180 aaKnown RBP eCLIP29.13■■■□□ 2.25
HOXB3-201ENST00000311626 GYG1P46976 350 aa29.12■■■□□ 2.25
HOXB3-201ENST00000311626 TRIM22Q8IYM9 498 aa29.12■■■□□ 2.25
HOXB3-201ENST00000311626 CRACR2BQ8N4Y2 399 aaPredicted RBP29.12■■■□□ 2.25
HOXB3-201ENST00000311626 CABP5Q9NP86 173 aa29.12■■■□□ 2.25
HOXB3-201ENST00000311626 ANKRD36CQ5JPF3 1778 aa29.12■■■□□ 2.25
HOXB3-201ENST00000311626 PRDM1O75626 825 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 IGHMBP2P38935 993 aaKnown RBP29.11■■■□□ 2.25
HOXB3-201ENST00000311626 STAG1Q8WVM7 1258 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 SHISA4Q96DD7 197 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 FBXO2Q9UK22 296 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-201ENST00000311626 ZHX1Q9UKY1 873 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-201ENST00000311626 ERICH2A1L162 156 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 FMR1Q06787 632 aaKnown RBP eCLIP29.11■■■□□ 2.251e-8■□□□□ 9.5
HOXB3-201ENST00000311626 SYCP1Q15431 976 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 HOMER1Q86YM7 354 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 ZNF654Q8IZM8 581 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 INTS13Q9NVM9 706 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 MAN1B1Q9UKM7 699 aa29.11■■■□□ 2.25
HOXB3-201ENST00000311626 FAM237AA0A1B0GTK4 181 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 MDM2Q00987 491 aaPredicted RBP29.1■■■□□ 2.25
HOXB3-201ENST00000311626 PPARAQ07869 468 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 KMT5BQ4FZB7 885 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 SMIM5Q71RC9 77 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 RAI14Q9P0K7 980 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 EVX2Q03828 476 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 FANCBQ8NB91 859 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 CCDC87Q9NVE4 849 aa29.1■■■□□ 2.25
HOXB3-201ENST00000311626 STK36Q9NRP7 1315 aa29.09■■■□□ 2.25
HOXB3-201ENST00000311626 SART3Q15020 963 aaKnown RBP29.09■■■□□ 2.25
HOXB3-201ENST00000311626 FAM177A1Q8N128 213 aaPredicted RBP29.09■■■□□ 2.25
HOXB3-201ENST00000311626 CGNQ9P2M7 1197 aaKnown RBP29.09■■■□□ 2.25
HOXB3-201ENST00000311626 DYNLL1P63167 89 aaKnown RBP29.09■■■□□ 2.25
HOXB3-201ENST00000311626 VPS54Q9P1Q0 977 aa29.09■■■□□ 2.25
HOXB3-201ENST00000311626 CCDC152Q4G0S7 254 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 EARS2Q5JPH6 523 aaKnown RBP29.08■■■□□ 2.25
HOXB3-201ENST00000311626 UBAC1Q9BSL1 405 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 TMX1Q9H3N1 280 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 SLU7O95391 586 aaKnown RBP29.08■■■□□ 2.25
HOXB3-201ENST00000311626 CASP1P29466 404 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 ITPK1Q13572 414 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 POSTNQ15063 836 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 WASF1Q92558 559 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 COL4A1P02462 1669 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 DISP2A7MBM2 1401 aa29.08■■■□□ 2.25
HOXB3-201ENST00000311626 CAMTA2O94983 1202 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 C3orf67Q6ZVT6 689 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 KCND1Q9NSA2 647 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 TOP1P11387 765 aaKnown RBP29.07■■■□□ 2.24
HOXB3-201ENST00000311626 DNAI1Q9UI46 699 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 PTPREP23469 700 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 NOM1Q5C9Z4 860 aaKnown RBP29.07■■■□□ 2.24
HOXB3-201ENST00000311626 FBXO38Q6PIJ6 1188 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 VSTM4Q8IW00 320 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 CSRNP2Q9H175 543 aa29.07■■■□□ 2.24
HOXB3-201ENST00000311626 CHD4Q14839 1912 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 TNKSO95271 1327 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 KCNQ4P56696 695 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 ERCC6LQ2NKX8 1250 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 DEXIO95424 95 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 ERO1AQ96HE7 468 aa29.06■■■□□ 2.24
HOXB3-201ENST00000311626 PSDA5PKW4 1024 aaPredicted RBP29.05■■■□□ 2.24
HOXB3-201ENST00000311626 WNT7AO00755 349 aa29.05■■■□□ 2.24
HOXB3-201ENST00000311626 NTSR2O95665 410 aa29.05■■■□□ 2.24
HOXB3-201ENST00000311626 NFE2L3Q9Y4A8 694 aa29.05■■■□□ 2.24
HOXB3-201ENST00000311626 PNPLA7Q6ZV29 1317 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 CDK11BP21127 795 aaKnown RBP29.04■■■□□ 2.24
HOXB3-201ENST00000311626 MED15Q96RN5 788 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 FOXP1Q9H334 677 aaPredicted RBP29.04■■■□□ 2.24
HOXB3-201ENST00000311626 MAGEB6P1A0A0J9YX57 407 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 FANCGO15287 622 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 CBFA2T2O43439 604 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 GNAT2P19087 354 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 EPSTI1Q96J88 318 aa29.04■■■□□ 2.24
HOXB3-201ENST00000311626 SAMSN1Q9NSI8 373 aaKnown RBP29.04■■■□□ 2.24
HOXB3-201ENST00000311626 NRDCO43847 1150 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 PLEKHA8P1O95397 391 aa29.03■■■□□ 2.24
HOXB3-201ENST00000311626 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms