RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 GDF11O95390 407 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 HMGN5P82970 282 aaKnown RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 NR5A1Q13285 461 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 NFIAQ12857 509 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PRAMEF18Q5VWM3 479 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 CCDC84Q86UT8 332 aaPredicted RBP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 SPICE1Q8N0Z3 855 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 FLAD1Q8NFF5 587 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 CNNM2Q9H8M5 875 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PLSCR1O15162 318 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 MARCH6O60337 910 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 LIG1P18858 919 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 HEATR3Q7Z4Q2 680 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 RASGRP4Q8TDF6 673 aa9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.98□□□□□ -0.81
LCLAT1-201ENST00000309052 PFKFB2O60825 505 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 CTDNEP1O95476 244 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 NLRP5P59047 1200 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 EYA3Q99504 573 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 TNMDQ9H2S6 317 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 ATP6V0A2Q9Y487 856 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 ABCC6O95255 1503 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 CRYBG1Q9Y4K1 1723 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 GSTO1P78417 241 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 KLHL40Q2TBA0 621 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 L1TD1Q5T7N2 865 aaKnown RBP9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 KRT40Q6A162 431 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 FSIP1Q8NA03 581 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 PLIN2Q99541 437 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 CABP5Q9NP86 173 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 CLIP2Q9UDT6 1046 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 SIPA1L3O60292 1781 aaPredicted RBP9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 ATRNO75882 1429 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 EXOSC10Q01780 885 aaKnown RBP9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 TTLL6Q8N841 843 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 SPC24Q8NBT2 197 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 JDP2Q8WYK2 163 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 TACC3Q9Y6A5 838 aa9.97□□□□□ -0.81
LCLAT1-201ENST00000309052 ECE2O60344 883 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 SNAP25P60880 206 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 FANCBQ8NB91 859 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 TEKT1Q969V4 418 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 SLC16A2P36021 539 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 ENAHQ8N8S7 591 aaPredicted RBP9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 CNKSR1Q969H4 720 aa9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 ZSCAN10Q96SZ4 725 aaPredicted RBP9.96□□□□□ -0.81
LCLAT1-201ENST00000309052 SH2B2O14492 632 aaPredicted RBP9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 CDKL5O76039 1030 aa9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 MBD3O95983 291 aa9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 STAMQ92783 540 aa9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 KINO60870 393 aaKnown RBP9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 DIS3L2Q8IYB7 885 aaKnown RBP9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 TMOD2Q9NZR1 351 aa9.96□□□□□ -0.82
LCLAT1-201ENST00000309052 CCAR1Q8IX12 1150 aaKnown RBP9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 RPAP1Q9BWH6 1393 aaPredicted RBP9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 SHROOM1Q2M3G4 852 aaPredicted RBP9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 CLIC6Q96NY7 704 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 LY9Q9HBG7 655 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 SP8Q8IXZ3 490 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 TMEM87BQ96K49 555 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 DAGLAQ9Y4D2 1042 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 CLIC4Q9Y696 253 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 ARHGAP27Q6ZUM4 889 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 ZFPM1Q8IX07 1006 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 STAG2Q8N3U4 1231 aa9.95□□□□□ -0.82
LCLAT1-201ENST00000309052 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 VEGFAP15692 232 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 CDC25AP30304 524 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 ZNF174Q15697 407 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 LEO1Q8WVC0 666 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 FDPSP14324 419 aaKnown RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 DDIT3P35638 169 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 ZNF274Q96GC6 653 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 PGBD1Q96JS3 809 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 ZNF396Q96N95 335 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 SCAND2PQ9GZW5 306 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 USP25Q9UHP3 1055 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 FZD1Q9UP38 647 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 XBP1P17861 261 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 SLF2Q8IX21 1173 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 IGDCC4Q8TDY8 1250 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 CCDC196A0A1B0GTZ2 297 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 BECN2A8MW95 431 aa9.94□□□□□ -0.82
LCLAT1-201ENST00000309052 NR1I2O75469 434 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms